Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0157 ATGGCTTTTGACTTAAGTGCTGTTTTTCCAAAATTGCAAATGCTATCCACTTCTGATCATGGTTCCGTCGTCTCCATGAACCTGTTTGTGGCACTCCTATGTGCTTGTATTGTCATTGGCCATCTTCTCGAGGAAAACCGGTGGATGAATGAGTCGATCACTGCCCTTTTGATTGGTCTTTGCACTGGTGTAGTCATTTTGCTGATTAGAGGCGGTAAAAGCTCGCGTCTTCTTGTTTTCAGTGAAGATCTTTTCTTCATATACCTTCTGCCACCTATCATATTCAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTGTTAATTTCATCACCATTGTGCTGTTTGGTGCTGTTGGCACATTAATATCTTTTGCCATCATAACTTCCGGTGTTACTCAATTTTTTAAAAGGATGGATATTGGTCCACTTGAAATAGGGGATTATCTAGCAATTGGTGCAATATTTGCTGCGACAGATTCTGTGTGCACATTGCAGGTGTTAAATCAGGATGAGACACCTTTACTCTACAGTCTTGTGTTTGGGGAGGGTGTTGTCAACGATGCTACATCAGTTGTGCTTTTCAATGCAATTCAAAGCTTTGACCTCAATCAGATCAACTCCAAAATCGCGTTAAAGTTTTTTGGCAACTTCTTGTATCTGTTTATTGCAAGCACAATGCTTGGGGTTTTGACTGGTCTGCTCAGTGCTTACATTATCAAAAAGCTGTATATTGGCAGGCATTCCACAGATCGTGAGGTTGCTCTTATGATTCTAATGGCATACCTTTCCTACATACTGGCTGAGTTATGCTATCTGAGTGGCATTCTTACTGTATTCTTTTGTGGAATTGTGATGTCTCATTATACTTGGCATAATGTGACTGAGAGTTCAAGAGTCACTACCAAGCATACTTTTGCAACCTTGTCGTTTGTTGCTGAGACATTTATCTTCCTTTATGTTGGTATAGATGCCTTGGACATTGAAAAATGGAGGTTTGTTAGTGATAGCCCTGGAAAATCAGTAGCCGTGAGTTCAGTATTGCTGGGTCTAGTACTTGCTGGAAGAGCAGCTTTTGTTTTCCCTTTATCCTTCTTATCCAACTTAGCTAAAAAGTCGCCAAATGAGAAAATTTCCTTCAGGCAGCAAGTGATCATTTGGTGGGCTGGTCTTATGAGAGGATCTGTTTCAATGGCACTCGCATATAATCAGTTCACCATGTCAGGGCATACTCAACTGCGATCCAATGCAATCATGATCACCAGCACCATCACTGTTGTGCTTGTCAGCACAGTGGTCTTTGGTTTGATGACTAAGCCACTCATAAGGTGTTTGCTGCCTCACACTAAACACACAAGCAGCGTGGTAACCACAGAAACATCTACTCCAAAATCGGTGACTGTGCCGCTTCTTGGAGGTGCCCAAGATTCTGAAGCTGATCTTTTTGGACATGAAATTATTCGTCCAAGCAGCATTCGTGCATTACTAACCACTCCAACACACACTGTTCATCGCTACTGGCGTAAGTTTGACGATGCATTCATGCGTCCCGTTTTTGGAGGCAGGGGTTTTGTTCCTGTAGAACCTGGCTCTCCAACTGAACGAAATGGTCGTCATCAGTGGCATTGA 1629 0.4236 MAFDLSAVFPKLQMLSTSDHGSVVSMNLFVALLCACIVIGHLLEENRWMNESITALLIGLCTGVVILLIRGGKSSRLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIVLFGAVGTLISFAIITSGVTQFFKRMDIGPLEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNQINSKIALKFFGNFLYLFIASTMLGVLTGLLSAYIIKKLYIGRHSTDREVALMILMAYLSYILAELCYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAETFIFLYVGIDALDIEKWRFVSDSPGKSVAVSSVLLGLVLAGRAAFVFPLSFLSNLAKKSPNEKISFRQQVIIWWAGLMRGSVSMALAYNQFTMSGHTQLRSNAIMITSTITVVLVSTVVFGLMTKPLIRCLLPHTKHTSSVVTTETSTPKSVTVPLLGGAQDSEADLFGHEIIRPSSIRALLTTPTHTVHRYWRKFDDAFMRPVFGGRGFVPVEPGSPTERNGRHQWH 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0157 542 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Glsi11g0157 542 NCBIfam sodium/hydrogen exchanger 3 26 453 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi11g0157 542 Gene3D - 146 197 - -
Glsi11g0157 542 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi11g0157 542 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi11g0157 542 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi11g0157 542 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi11g0157 542 PANTHER SODIUM/HYDROGEN EXCHANGER 16 519 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0157 Glsi-ChrGlsi11 1099381 1104417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0157 11 536 Antiporters AT3G05030 77.547 0.0 840
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0157 11 1099381 1104417 Glsi11g0157 11 1099381 1104417 CCT
Glsi11g0157 11 1099381 1104417 Glsi11g0157 11 1099381 1104417 ECH