Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0154 ATGGGGTGTGTGCTTAGTCGAGAAGTGTCATCGGAAATAATCTCTGAGGGGAAAGAGAAGAGAGATTTGAGTGCTGAATCAAGCCGGAATATAGATGAAGTCTCCGCAAGGAATGCTGATAGGAACGGGGTGGAAGTTCAGAACGGTGGGAGCCCGAACGAAGAGAAGGATGGTGATAATGAGGCCCAGGTCCAGCGACCACGGGGCGGAAGAAGAAGAAGATCAAAGCCAAACCCAAGGCTAAGTAACCCTCCCAAACATTTGCAGGGGGAGCAAGTAGCAGCTGGGTGGCCACCCTGGCTTACGGCAGCGTGTGGGGAAGCACTCAGTGGGTGGATTCCTCGGAAGGCTGACACATTTGAGAAAATTGATAAGATCGGCCAAGGAACGTATAGCAATGTATACAAAGCTAAAGACATGTTGACTGGTAAAATTGTTGCACTGAAGAAGGTTCGATTCGACAATTTGGAACCTGAAAGTGTAAAGTTCATGGCTAGGGAGATTATTATTTGTCGAAGATTGGATCATCCCAATGTTGTAAAGTTGGAAGGTTTAGTCACATCAAGAATGTCTTGTAGTTTGTATTTGGTCTTTGATTACATGGAGCATGATTTAGCTGGACTTGGTGCAAGCCCGGGAATCAAGTTCACAGAGCCTCAGGTCAAATGTTATATGCACCAACTATTATCAGGACTTGAGCACTGTCATAACCGTCATGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAGTGGAGGAATACTTAAGATAGCTGACTTTGGATTGGCCTCTTTCTTTGATCCAAGCCACAAGCATCCCATGACAAGTCGTGTAGTTACACTTTGGTATCGACCTCCTGAGTTGCTTCTTGGTGCCACGGAATATGGTGTGGGTGTGGACCTTTGGAGTGCAGGTTGCATTTTAGGAGAGTTATTGGCTGGGAAGCCAATTATGCCTGGTCGTACAGAGGTGGAGCAACTGCATAAGATATATAAACTGTGTGGTTCACCTTCAGATGAGTACTGGAAGAAGTCAAAGCTGCCTAATGCTACTTTGTTTAAACCCCGAGATCCATACAAAAGATGCATAAAAGAGACGTTTAAAGATTTTCCACCTTCTGCACTGCCCCTTATTGATACTCTTCTTGCAACTGATCCAGCAGAGCGGAAGACTGCCTCAGATGCCTTAAGAAGTGAGTTCTTCACCACAGAACCTTATGCTTGTGATCCATCTAGTCTTCCAAAATATCCCCCAAGCAAGGAAATTGATGCTAGACGACGTGATGATGAAGCAAGGAGACTACGAGCTGCAGGCAAATCTCAGGTTGATGGTGCAAAGAAAACACGTCGTGATCGTGCTGTTAAAGCTATTCCTGCTCCTGAAGCCAATGCGGAGCTTCAATCCAATATTGATAGAAGACGTCTAATCACTCGTGCAAATGCTAAGAGCAAGAGCGAAAAGTTCCCTCCACCCCATCAAGATGGACAACTTGGCTTCCCCCTGGGAGCTTCACATCATATCGATCCGGACAATGTTCCTCCTGATGTCTCGTTCAGTTCCACTTCATTTATTTATTCAAAAGAACCATTCCAGGCATGGTCAGGTCCCATTGGTAACTCTGCTGGCATTGGTGCGCCAAAGCGGAAGAAACATGCTGTAGGTGATACATTGGATTCATCAAAACAACATACAGGTGTCCACAAGAATAACGTTAAAGGAAAGAAATTCATAGCCTAG 1746 0.4513 MGCVLSREVSSEIISEGKEKRDLSAESSRNIDEVSARNADRNGVEVQNGGSPNEEKDGDNEAQVQRPRGGRRRRSKPNPRLSNPPKHLQGEQVAAGWPPWLTAACGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIIICRRLDHPNVVKLEGLVTSRMSCSLYLVFDYMEHDLAGLGASPGIKFTEPQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIDSGGILKIADFGLASFFDPSHKHPMTSRVVTLWYRPPELLLGATEYGVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPRDPYKRCIKETFKDFPPSALPLIDTLLATDPAERKTASDALRSEFFTTEPYACDPSSLPKYPPSKEIDARRRDDEARRLRAAGKSQVDGAKKTRRDRAVKAIPAPEANAELQSNIDRRRLITRANAKSKSEKFPPPHQDGQLGFPLGASHHIDPDNVPPDVSFSSTSFIYSKEPFQAWSGPIGNSAGIGAPKRKKHAVGDTLDSSKQHTGVHKNNVKGKKFIA 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0154 581 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Glsi11g0154 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Glsi11g0154 581 PANTHER CELL DIVISION PROTEIN KINASE 118 408 - -
Glsi11g0154 581 MobiDBLite consensus disorder prediction 541 581 - -
Glsi11g0154 581 MobiDBLite consensus disorder prediction 1 91 - -
Glsi11g0154 581 MobiDBLite consensus disorder prediction 413 476 - -
Glsi11g0154 581 CDD STKc_CDK9_like 120 404 - -
Glsi11g0154 581 FunFam probable serine/threonine-protein kinase At1g54610 107 202 - -
Glsi11g0154 581 MobiDBLite consensus disorder prediction 422 459 - -
Glsi11g0154 581 MobiDBLite consensus disorder prediction 12 39 - -
Glsi11g0154 581 MobiDBLite consensus disorder prediction 52 68 - -
Glsi11g0154 581 Gene3D Transferase(Phosphotransferase) domain 1 203 443 - -
Glsi11g0154 581 Gene3D Phosphorylase Kinase; domain 1 107 202 - -
Glsi11g0154 581 SMART serkin_6 120 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0154 581 FunFam probable serine/threonine-protein kinase At1g54610 203 444 - -
Glsi11g0154 581 SUPERFAMILY Protein kinase-like (PK-like) 115 411 IPR011009 -
Glsi11g0154 581 Pfam Protein kinase domain 120 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0154 581 ProSiteProfiles Protein kinase domain profile. 120 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0154 Glsi-ChrGlsi11 1061890 1067135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0154 112 444 Core Cell Cycle Gene Families AT5G10270 51.003 1.76e-118 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Glsi11g0154 Pkinase 1.1e-65 CL0016