Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0136 ATGCTATCGCCGTTGGTTTCTTGGATCTTGCCGTCCTCCTCTTCTTCTTCCTCATCGGACGGAGAAGTTTATAGTGACGACGGAGATCATTATGAGAACGTTGGCGAGAACGAGCACTTCCTCAGCGAACCAGAGGAGTTTCCCTCAACATCATGCGCTGCTAGCGATCCCATTCCCATTCCTGTTGCGCTCGCCATTCCCGATGCCTCCCCCTCCGTCACCGTGGCCTTCCCCCCACCCCACCACTCTTCCCTTCCAAATGTAGAAACCGACTCCACGGTCCCTCGCCCAAAACGACAGCGTATCAACTATTCTAATAGACAATATCAGAGGCTGTGGACGAAGCAGGACGAGATCGAACTCTTAAGGGGATACCTCGATTATATTAGGCAGCGCCGATGGGCCACCTCCTCTCTCCAAAACGACGTCGCACTCTTCTACGATCGCATCAGACCGAAATTGAAGATGGATTTCAACCAAAACCAACTCGTCGAGAAGCTGCGGAGATTAAAGAGAAAGCACAAGAACGCTTGGGACAGCATCAACTCAGGCAGGGAAGTTTCCTACAAGAGCCCTCAGGAGGAGGCCATTTTCCACATTTCCCAGAGGATTTGGGGCAAGAACAGAGACCAAGAATCAAGCCCGAATCATGATACCCGTAGTTTTGGCAATATTAAGATGAAGAGTGAATTAGTTGACAGTGATGAAATGAGGCGGCCGAAGAGGTCGCGGTTGATCAGCGATGTCTCAGGGCATTTGAATGACCAGAACATAGATAATACTAGTAGTATACAGGGCTTGATCGAAGAGACAATGAGGTCGTGTTTGTCACCTATGGTGAAGGAAGTGTTGAACAACGTAGTGGAAGGGTCAGTTGGAGTTGGAGGGTTATCGCTGAGTTTGATTGAGCAATCTGGGAGTGGGGGAGTGGGCGATGAGAAATGGAGGAAGCAGAGGATTATGGAGCTGGAAGAGTACTTGAAGCGGTTGGAGTTGTTGCAGGATCAAATTAAGGCTAGATTAGAGGAGTTGCGGTCCAGCGGAGAATGA 1050 0.4981 MLSPLVSWILPSSSSSSSSDGEVYSDDGDHYENVGENEHFLSEPEEFPSTSCAASDPIPIPVALAIPDASPSVTVAFPPPHHSSLPNVETDSTVPRPKRQRINYSNRQYQRLWTKQDEIELLRGYLDYIRQRRWATSSLQNDVALFYDRIRPKLKMDFNQNQLVEKLRRLKRKHKNAWDSINSGREVSYKSPQEEAIFHISQRIWGKNRDQESSPNHDTRSFGNIKMKSELVDSDEMRRPKRSRLISDVSGHLNDQNIDNTSSIQGLIEETMRSCLSPMVKEVLNNVVEGSVGVGGLSLSLIEQSGSGGVGDEKWRKQRIMELEEYLKRLELLQDQIKARLEELRSSGE 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0136 349 Coils Coil 316 347 - -
Glsi11g0136 349 PANTHER BNAANNG10740D PROTEIN-RELATED 14 343 IPR007592 GO:0006355
Glsi11g0136 349 MobiDBLite consensus disorder prediction 1 22 - -
Glsi11g0136 349 MobiDBLite consensus disorder prediction 1 54 - -
Glsi11g0136 349 Pfam Protein of unknown function, DUF573 110 206 IPR007592 GO:0006355
Glsi11g0136 349 MobiDBLite consensus disorder prediction 23 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0136 Glsi-ChrGlsi11 908945 909994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0136 57 346 GeBP Transcription Factor Family AT5G28040 35.196 1.86e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Glsi11g0136 DUF573 1.2e-24 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0136 11 908945 909994 Glsi11g0136 11 908945 909994 CCT