Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0119 ATGAAGGCGGCAAGCAAATGGATTAGAAACTACCTTATAGGGAAAAAGGAAGAGAAATACAAGATTGATACAGACTCCACGAAGTATAAGATAGAAAGTCCCAAAGTGAAGCGCAAATGGAGCTTTGGAAGAATAAAAAGCAAGGCAGCAGTGCATAAATTTTCTAGATCTTTTGATTCAGTAGACTCAACTAAGCTACAAATACAGTCGGTAGAGGTGGAAACTCAGGTTTTCAACAGTGTTTCAAAAACACAACACATTGAAATCGCTGCTGCTACGAGGGTTCAGGCTGCTTTTCGCTCATACTTGGCAAGGAAGGCATTGCATGCATTAAGAGGATTAGTCAAGTTACAGGCACTGGTGAGAGGTCACCTTGTAAGGAAACGAACAACTGCTATACTGCGAGGCATGCATGCTTTAATGGCCATACAAGTTAGAGCTCGCATTCACAGAATTCGGACGGCAGAAGAAGCAAACCTTCTCGTTGCAAACCAGTCATCCCAACATAGACAAATCCCTCGGGACGAAGTTCTAATACGAGAGAATAAAGATACGAGTCTCAGAGAAATGCAGCGAGTTATAAAAAGCAGAAGTGGCCCTTTAGATCGTTCACATGTCAAGAGCACAGAGCATGGTTCCATGACGTTCTATTCAAACCGAAAATACCAATACAAGGAGAATACTTTGATCACAGAACCAAGCAGTGCAGGAAACACCGCCTTGTCTGAACTAAACCCAACAAAAGCCATATCTACTTGCCAGCGCCGCTCAGTCTCATGGGCACCTAATTACATGACCAAGACAGAATCTTCAAGGGCTAAAGCTAGGTCTCAGAGTGAACCAAAACAACGACCCAAACTAAGTATGAGACAGAAAAACAAATATCTGTCCTCAGGCTCCTCACGCTTCAATCATGGAAACCTGGACCATTGGGCTATTAACTATAGGGGGTCATTGACGGACAGTAAAAGTGATTCCTTTAGAAGCAGCATGGCGACTAGTGATTCATATCATTGA 1017 0.4297 MKAASKWIRNYLIGKKEEKYKIDTDSTKYKIESPKVKRKWSFGRIKSKAAVHKFSRSFDSVDSTKLQIQSVEVETQVFNSVSKTQHIEIAAATRVQAAFRSYLARKALHALRGLVKLQALVRGHLVRKRTTAILRGMHALMAIQVRARIHRIRTAEEANLLVANQSSQHRQIPRDEVLIRENKDTSLREMQRVIKSRSGPLDRSHVKSTEHGSMTFYSNRKYQYKENTLITEPSSAGNTALSELNPTKAISTCQRRSVSWAPNYMTKTESSRAKARSQSEPKQRPKLSMRQKNKYLSSGSSRFNHGNLDHWAINYRGSLTDSKSDSFRSSMATSDSYH 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0119 338 Gene3D - 89 140 - -
Glsi11g0119 338 MobiDBLite consensus disorder prediction 266 301 - -
Glsi11g0119 338 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Glsi11g0119 338 Pfam IQ calmodulin-binding motif 115 129 IPR000048 GO:0005515
Glsi11g0119 338 Pfam IQ calmodulin-binding motif 90 108 IPR000048 GO:0005515
Glsi11g0119 338 Pfam Protein of unknown function (DUF4005) 249 329 IPR025064 -
Glsi11g0119 338 ProSiteProfiles IQ motif profile. 88 116 IPR000048 GO:0005515
Glsi11g0119 338 PANTHER IQ-DOMAIN 5-RELATED 1 301 - -
Glsi11g0119 338 SMART iq_5 87 109 IPR000048 GO:0005515
Glsi11g0119 338 SMART iq_5 110 131 IPR000048 GO:0005515
Glsi11g0119 338 MobiDBLite consensus disorder prediction 273 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0119 Glsi-ChrGlsi11 811662 812862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0119 1 285 IQD Protein Family AT4G14750 35.463 6.80e-33 125