Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0102 ATGAATGCCAGCGCCCGTGTCTTGCTTTCTCTTGTGTGTATCTTCGTTTCGTTGAATGCCCTTCATGTATCGAGCCAGGACGCAGAGCCGTTGATGTTGGGCTGTGGCTTGGGTGATGGTGGTGGAAAAGACGCAGATGGAAGGCAATGGGGGCCTGATACCAAGTTCCTGTCAGGAGGTAATTCCACCACCTCCAGAGCCTCCTACCAAGACCCTTCACTTTTGTCTGAGGTTCCATACATGACTGCTCGAATTTTCACATCCGAGGCGACATACAAATTCCCTGTTCTTCCTGATAAGCGTTACTGGCTTAGGCTCCACTTTTATCCCTCTGTTTATGGCAGTTTCAATCCCTCCATTTCATATTTCTCCGTCACTGCAAATGGGGTTACCCTCTTGAGCAATTTCAGCGCCTCCATTACTTGTCATGCCCTCTCCCAAGCTTACCTTGACAGAGAGTATTCCCTTGCGCCCCTCAACTCGGATACTCTCTCCATTACCTTCAAGCCTTCTGACAAATACAATGGTGCTTTCGCTTTTGTGAATGGTCTTCAGTTGATCCAAATGCCAGAGTTGTTTGATTCGGCCCCGTTGGTGGGTGCAACGGACCAAACCGTGGATACCCAAAGTTTGCATTTGCAGACAATGTTTAGACTTAATGTTGGTGGACAGTATATATCTCCAACCCAAGACTCTGGTCTTACCAGGATGTGGTACGATGACACGCCTTACCTGTTTGGTGCAGCAACTGGTGCGACCAACCAAGCAGCCAAGGACGTCAAAATCAACTACGGAAGCATGCCACAGTACATGGCTCCTTCTAATGTCTACTCCACATCAAGATCGATGGGCGGCGATGAGAATATGAACATGGGCTTTAACCTCACATGGATTTTCCAGATTGATCCAAATTCCATGTACCTTACAAGGTTGCATTTTTGTGATTTCTATTATTCCAAAGTGAATGAAATAGAATTCGATGTTTTCATCAACAATCAAACAGCGCAGCGTCAAGCGGATGTGATTGCGTGGACGGGAGGTAAAGGCGTGCCAACTTACAAGGACTACGTGATATTCGTTAACGATGGGCAGGGCGATGAGCAGCTTTGGCTTGCTCTGCACCCAGCACCCGAAAACAAGCCCCAATTCTATGATTGCATACTGAATGGGGTGGAGATATTCAAGCTCAATGACACAAACTTGGCGGGCCCCAATCCTCAGCCTTCAGAGATGCTCGCGAAGTTTGAAGAGAAGGCAAAAACTTTCCAAGAACCTGATGACAGTAATAATACCGCTGTTATCGGTGGAGGTGCCGCAAGTGTTGCCTTAGTGGCTGCAATAGGCATTGTGGTTTACAAGAAGAAGAAGAGAGTTCCGGGATCAGACTCACACACATCAAGCTGGCTGCCACTCTATGGGAATTCTCATACTTCTGGCTGCACCACCAACTCTGGGAAGAGCACTGGTGGCAGCAACCTATCAGCCATGGCTCAAGGTCTTTGCCGTTATTTCTCCTTACAAGAGATGAAGCACGCAACTAAGAATTTCGACGAGTCTAATGTTATTGGGGTTGGAGGATTTGGAAAGGTATATAAAGGTGTTATTGATAATGGGTTGAAAGTCGCAATCAAAAGGTCGAACCCACAATCGGAACAAGGAGTTAATGAATTCCAGACCGAAATTGAGATGCTTTCCAAGCTGAGACACAGGCATTTGGTGTCCTTGATTGGATTTTGTGAGGAAGATAATGAAATGTGCCTGGTTTATGACTACATGGCTCGTGGTACCCTACGGGAACATCTTTACAAGGGCAACAAATCTTTGTCTACTCTAACATGGAAGCAAAGGCTGGAGATCTGCATTGGATCTGCCAGAGGGCTTCACTACCTTCACACTGGAGCTAAGTACACCATCATTCATAGAGATGTCAAGACAACTAACATTCTCTTGGATGAGAACTGGGTTGCCAAGGTTTCAGACTTCGGCTTGTCTAAAACTGGTCCGGATATGAACAATGGCCACGTTAGCACAGTGGTGAAGGGTAGCTTTGGCTACTTGGATCCTGAATATTTCAGGAGGCAACAGTTAACTGAAAAGTCTGATGTCTATTCTTTTGGGGTTGTCCTGTTTGAGGTGCTCTGCGCAAGGCCTGCTCTGAATCCTAGCCTTTCGAAGGAACAGGTTAGTCTTGCCGATTGGGCTCTGATCTCGAAAAGAAAAGGAACTCTGGAGGATATCGTCGACCCCCATCTCAAAGGAAAGATCAACCCCCAAAGCTTGATCACGTTTGCAGACACGGCTGAGAAGTGTCTGTCTGATCATGGACATGAGCGCCCCTCAATGAATGATCTGTTGTGGAATCTCGAACTTGCTCTCAACCAGCAAGAAAACCAAGATGCTTCATCTCCCTCTACGTGTGATGATGAGGGTGAGTTTGAAGATATAAACTTGAGAAGCAACGAGGCGGCACCCATTATAGGAATCTAA 2487 0.4672 MNASARVLLSLVCIFVSLNALHVSSQDAEPLMLGCGLGDGGGKDADGRQWGPDTKFLSGGNSTTSRASYQDPSLLSEVPYMTARIFTSEATYKFPVLPDKRYWLRLHFYPSVYGSFNPSISYFSVTANGVTLLSNFSASITCHALSQAYLDREYSLAPLNSDTLSITFKPSDKYNGAFAFVNGLQLIQMPELFDSAPLVGATDQTVDTQSLHLQTMFRLNVGGQYISPTQDSGLTRMWYDDTPYLFGAATGATNQAAKDVKINYGSMPQYMAPSNVYSTSRSMGGDENMNMGFNLTWIFQIDPNSMYLTRLHFCDFYYSKVNEIEFDVFINNQTAQRQADVIAWTGGKGVPTYKDYVIFVNDGQGDEQLWLALHPAPENKPQFYDCILNGVEIFKLNDTNLAGPNPQPSEMLAKFEEKAKTFQEPDDSNNTAVIGGGAASVALVAAIGIVVYKKKKRVPGSDSHTSSWLPLYGNSHTSGCTTNSGKSTGGSNLSAMAQGLCRYFSLQEMKHATKNFDESNVIGVGGFGKVYKGVIDNGLKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHRHLVSLIGFCEEDNEMCLVYDYMARGTLREHLYKGNKSLSTLTWKQRLEICIGSARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPDMNNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLSKEQVSLADWALISKRKGTLEDIVDPHLKGKINPQSLITFADTAEKCLSDHGHERPSMNDLLWNLELALNQQENQDASSPSTCDDEGEFEDINLRSNEAAPIIGI 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0102 828 CDD STKc_IRAK 522 789 - -
Glsi11g0102 828 FunFam Receptor-like protein kinase FERONIA 592 804 - -
Glsi11g0102 828 PANTHER OS07G0166700 PROTEIN 500 795 IPR045272 GO:0004714|GO:0006468
Glsi11g0102 828 SUPERFAMILY Protein kinase-like (PK-like) 492 790 IPR011009 -
Glsi11g0102 828 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Glsi11g0102 828 Pfam Malectin-like domain 34 395 IPR024788 -
Glsi11g0102 828 Pfam Protein tyrosine and serine/threonine kinase 520 733 IPR001245 GO:0004672|GO:0006468
Glsi11g0102 828 FunFam FERONIA receptor-like kinase 30 190 - -
Glsi11g0102 828 FunFam FERONIA receptor-like kinase 211 397 - -
Glsi11g0102 828 Gene3D Transferase(Phosphotransferase) domain 1 592 812 - -
Glsi11g0102 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Glsi11g0102 828 Gene3D Phosphorylase Kinase; domain 1 477 591 - -
Glsi11g0102 828 FunFam receptor-like protein kinase FERONIA 480 591 - -
Glsi11g0102 828 SMART serkin_6 516 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0102 828 ProSiteProfiles Protein kinase domain profile. 516 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0102 828 Gene3D - 211 396 - -
Glsi11g0102 828 Gene3D - 34 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0102 Glsi-ChrGlsi11 747435 749921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0102 20 818 Receptor kinase-like Gene Family AT3G51550 54.765 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi11g0102 Malectin_like 2.8e-37 CL0202