Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0092 ATGTCACTTCCCCGAGCCACTCGATCCACATTCACTTCCTCACACAAAACTTTCTCTCCTCGCCATTTTCGTCTTTCTTTCTTTCTTTTTCCATACAATTTCCCCTTACTCTTCCCAGATAATGGTGTTCCCAAGCTTTTTTTGTCATGTCCATTTGATTCCCTAGGGCTTCATTTGAACCTTTTGGCATATTCTGGGTATTCCTTATCAATATTTCTAACATCTTTTCATGTTGAGGTGAAGATCGAAGTCATCGGATCCCGAATTAGTTATCTTCATGGAGATAGTCCAAATGCTTCGGATTTAGAGCTAAATAATGTTCTTTCAAGATTCAAGAACTCAAAGGTATGTGGTGTTCAGTTGGTTATTCCGTATCTCTGGCTGCAGGGGACTCCTGTGAATATTATTGTAGGTTCTCATGTCTGGATTGAAGACCCAGATGTATCGTGGATTGATGGACAGGTATCAAAAATCAATGGAGCGGATGCAGAGATCGAAACTACCAATGGGAAAAAGGTTGTTGCAAAATTATCAAAATTATATCCCAAAGATATGGAAGCTCCTGCTGGTGGAGTGGATGATATGACTAAGCTGTCCTATTTGCACGAGCCTGGAGTCCTGCAGAACTTAAAAATTAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTTTAATTGCGATAAATCCATTCCAAAGACTACCTCATATCTATGATGCTCACATGATGCAACAATACAAGGGAGCGCCATTTGGAGAATTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCATTTAGGGCAATGGTTAACGAAGGAAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGCGATACCTTGCTTACTTAGGTGGTAGAGCTGCTACTGAAGGACGAACAGTAGAACAACAAGTTCTTGAATCAAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACTGTTAGGAATAACAACTCCAGCCGTTTTGGAAAATTTGTTGAGATCCAATTTGATAAGAGCGGAAGAATCTCAGGAGCAGCCATCCGAACTTACCTTCTGGAGAGGTCTCGGGTTTGCCAAATTAATGATCCTGAACGCAACTACCACTGCTTCTATCTTCTTTGTTCTGCACCTCAGGAGGAAATTGAGAAATACAAATTAGGACATCCTAAAACATTTCATTACCTTAACCAGTCAAATTGCTATGAACTGGTTGATACAAGTGATGCTCGTGAGTACCTTGCTACCCGGAGAGCTATGGATATTGTTGGAATAAGCCAAAAAGAGCAGGAAGCAATTTTCAGAGTTGTTGCTGCAATTCTTCACCTTGGTAATATTGTTTTTGCCAAAGGAAAGGAGATTGACTCATCAGTTCCAAAAGATGACAAAGCCAAATTCCACCTGAAAACAACTGCTGAGCTTCTCATGTGTGATGCTGATGCCTTGGAAGATGCATTATGTAAGCGTGTCATGATCACCCCCGAAGAAGTTATAAAGCGGAGCCTTGATCCCCAAAGTGCAGCAGTCAGTAGAGATGGCTTGGCTAAAACAATTTATTCTCGGCTATTTGACTGGTTGGTGGACAAGATAAATAATTCAATTGGACAAGATCCTAATTCCAAATCTTTGATTGGGGTCCTCGATATCTATGGTTTTGAAAGCTTTAAAACTAACAGTTTTGAGCAGTTTTGCATTAATTTCACAAATGAGAAGCTGCAGCAACATTTCAATCAGCACGTGTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATTGATTGGAGCTATATTGAATTTGTTGATAATAAAGATGTTCTGGACCTTATTGAAAAGAAACCTGGAGGAATCATCGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCAACACATGAAACATTTGCCAACAAACTTTATCAAACATTTAAGAACCACAAGCGCTTTATAAAGCCAAAATTGTCTCGAACAGATTTCACCATTGCTCATTATGCTGGGGAGGTTTTATACCAATCAGATCAATTTTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTGTTGAGTGCTTCCAAATGTCCTTTTGTAGCAGGCCTTTTTCCTCCACTTCCAGAAGAGACATCTAAATCTTCTAAATTTTCTTCAATTGGTTCTCGTTTTAAGCTACAACTACAGTCACTGATGGAGACCCTAAACTCTACAGAGCCTCATTACATTAGATGTGTGAAACCAAACAACCTCCTCAAACCTGCAATATTTGAGAATGTCAACATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGAATCAGTTGTGCCGGCTACCCTACTCGCCGTCCTTTCTTTGAATTTTCAAACCGATTTGGCATCCTTGCCCCAGAGGCCATGGAAGGACACTACGAAGATAAGGTTGTTTGCCAAAAGATTCTGGAAAAGATGGAGCTAAAAGGATATCAGATTGGAAAAACAAAGATATTCTTGAGAGCAGGTCAGATGGCTGAACTAGATGCACGGAGAGCTCAAGTACTCAGTAATGCAGCAAAAACTATCCAACGGCGCACACGAACCCATCAAGCTCGTAAACATTATCTTGCTTTGCGAATGACTACCATATACATGCAGTCTTTATGTAGAGGAAGACTTGCAATTAAAATCTTTGAGAACATGAGAAGGGTTGCTTCTGCTAAGAAAATTCAGAAGAACATACGCCGATATGAAGCTAGGAAAGCCTATAAAAGACTCCAAGAGTCAGTACTTACCTTGCAAACAGCTTTAAGGGCAATAGCTGCTCGTAAGGAGTTCAGATATAGGAAGCAGACTAAAGCTGCCATCATTATTCAGGCTCGATGGCGGTGCCACAAAGCTGCCTCATACTATAATAGACTCAAGAGAGGTACTATAATGGGACAATGCAGATGGAGGGGGCGTATAGCCAGGAGAGAACTTAGGAAGCTAAAAATGGCTGCAAGAGAAACTGGTGCACTTCAAGAAGCAAAGGATAAACTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAAAGTTTAAGGACAAACCTAGAGGAAGCCAAAGCACAAGAAGTAGCAAAACTGCAGAATTCATTGCAGGAGATGCAGAACAAAGTTGATGAAACCAATGCTTTACTTATCAAGGAGAGAGAGAATGCAAAGAAAGTTGTTGAAGAAGCACCTCCTGTTATAAAGGAAACCCAGGTTCTTGTTGAAGACACCCAAAAAATTGAATCACTAACAGTGGAAGTTGAGAGCCTAAAGACTGCACTAGAGTCAGAAAAACAGAAAGCTGATGACTTTGAAAGAAAGTACAATGAAGCCCAAGTTTGTAGTGAAGAAAGGGGTAAAAACTTAGAAGACACAGAGAAGAAGGTTCGTCAGCTCCAGGAATCATTGACCAGGCTAGAAGAGAAGATTACTAATTTAGAATCCGAGAATCAGGTTCTACGTCAACAAGCTGTCTCCATGGCGCCCAACAAGTTCCTTTCAGGACGCTCTAGATCTATTATTCAGAGAGGTGCTGAGAGTGGTCATATTGGAGGAGAAGCAAAGACATCTTTGGATCTGCATAGCCCATCAATGAACCAGAGGGAACACTCTGAAGTGGAGGATAAACCACAAAAGTCACTAAATGAGAAACAGCAGGAGAATCAAGAGTTGCTTATTAGATGTGTTGCACAACATCTAGGCTTTGCAGGGAACAGACCGATTGCTGCCTGTATCATATACAAATGTCTCTTGCATTGGCGATCATTTGAAGTAGAGCGTACTAGCGTTTTTGATCGTATTATTCAAACTATCGGCCATGCAATTGAGACCCAGGATAATAATGATATCTTGGCTTATTGGTTATCCAATGCCTCTACACTTCTCTTGTTACTCCAGCGCACACTTAAGGCAAGTGGTGCTGCTGGAATGGCTCCGCAACGCCGTCGTTCTTCATCAGCAACCCTATTTGGGAGGATGACACAAAGTTTCCGTGGAGCTCCAGCAGGAGTCAATCTTTCCCTAATCAACGGTAGCGGTGGAGTAGATACATTACGACAAGTTGAAGCCAAGTACCCAGCTCTTCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGAGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTATGCATCCAGGCACCGAGAACATCCAGAGCAAGCTTGGTTAAAGGATCATCACGCTCCGTTGCAAACACTGAAGCCCAGCGAGCTTTGATTGCTCACTGGCAGGGGATAGTAAAGAGCCTTGGGAACTTTCTGAATACTTTAAAAGCAAATCATGTTCCTCCATTTTTAGTTCGTAAGGTGTTCACACAGATATTTTCTTTCATTAATGTCCAACTATTCAACAGCCTTCTTTTAAGACGGGAGTGCTGCTCATTCAGCAATGGGGAATATGTCAAAGCTGGTTTGGCTGAATTGGAACATTGGTGTTATAAGGCAACAGATGAGTATGCAGGTTCAGCCTGGGATGAGCTTAAACATATTAGACAGGCTATTGGATTTCTGGTCATACATCAGAAACCAAAGAAAACTCTGGATGAAATAAGTCATGACCTGTGCCCAGTCCTCAGTATACAGCAGCTATATCGAATTGGCACCATGTACTGGGATGACAAGTATGGTACACATAGCGTGTCACCTGATGTCATATCCAATATGAGAGTGCTGATGACTGAAGATTCAAATAATGCAGTCAGTAATTCTTTCCTGTTGGATGACGATTCAAGCATTCCGTTTTCTGTTGATGACATATCAAAGTCCATGGAACAGATAGATATCTCGGACATTGAGCCCCCACCACTTATTCGTGAGAACTCCGGCTTTAGTTTCTTGTTGCCACGTTCAGATTGA 4971 0.4094 MSLPRATRSTFTSSHKTFSPRHFRLSFFLFPYNFPLLFPDNGVPKLFLSCPFDSLGLHLNLLAYSGYSLSIFLTSFHVEVKIEVIGSRISYLHGDSPNASDLELNNVLSRFKNSKVCGVQLVIPYLWLQGTPVNIIVGSHVWIEDPDVSWIDGQVSKINGADAEIETTNGKKVVAKLSKLYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAFRAMVNEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCSAPQEEIEKYKLGHPKTFHYLNQSNCYELVDTSDAREYLATRRAMDIVGISQKEQEAIFRVVAAILHLGNIVFAKGKEIDSSVPKDDKAKFHLKTTAELLMCDADALEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINNSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQIDWSYIEFVDNKDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRTDFTIAHYAGEVLYQSDQFLDKNKDYVVPEHQDLLSASKCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRPFFEFSNRFGILAPEAMEGHYEDKVVCQKILEKMELKGYQIGKTKIFLRAGQMAELDARRAQVLSNAAKTIQRRTRTHQARKHYLALRMTTIYMQSLCRGRLAIKIFENMRRVASAKKIQKNIRRYEARKAYKRLQESVLTLQTALRAIAARKEFRYRKQTKAAIIIQARWRCHKAASYYNRLKRGTIMGQCRWRGRIARRELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKSLRTNLEEAKAQEVAKLQNSLQEMQNKVDETNALLIKERENAKKVVEEAPPVIKETQVLVEDTQKIESLTVEVESLKTALESEKQKADDFERKYNEAQVCSEERGKNLEDTEKKVRQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIIQRGAESGHIGGEAKTSLDLHSPSMNQREHSEVEDKPQKSLNEKQQENQELLIRCVAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPAGVNLSLINGSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRIGTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIEPPPLIRENSGFSFLLPRSD 1656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0092 1656 ProSiteProfiles IQ motif profile. 959 986 IPR000048 GO:0005515
Glsi11g0092 1656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 913 IPR027417 -
Glsi11g0092 1656 Gene3D - 914 960 - -
Glsi11g0092 1656 Gene3D - 961 1010 - -
Glsi11g0092 1656 Gene3D - 862 913 - -
Glsi11g0092 1656 Pfam IQ calmodulin-binding motif 865 883 IPR000048 GO:0005515
Glsi11g0092 1656 Pfam IQ calmodulin-binding motif 913 932 IPR000048 GO:0005515
Glsi11g0092 1656 Pfam IQ calmodulin-binding motif 960 979 IPR000048 GO:0005515
Glsi11g0092 1656 ProSiteProfiles Dilute domain profile. 1288 1599 IPR002710 -
Glsi11g0092 1656 FunFam Myosin 2 440 554 - -
Glsi11g0092 1656 ProSiteProfiles IQ motif profile. 886 915 IPR000048 GO:0005515
Glsi11g0092 1656 FunFam Class V myosin 567 705 - -
Glsi11g0092 1656 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 136 185 IPR004009 GO:0003774|GO:0005524|GO:0016459
Glsi11g0092 1656 Pfam Myosin head (motor domain) 192 848 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0092 1656 Gene3D - 795 861 - -
Glsi11g0092 1656 MobiDBLite consensus disorder prediction 1203 1240 - -
Glsi11g0092 1656 Pfam Myosin N-terminal SH3-like domain 137 178 IPR004009 GO:0003774|GO:0005524|GO:0016459
Glsi11g0092 1656 ProSiteProfiles IQ motif profile. 982 1011 IPR000048 GO:0005515
Glsi11g0092 1656 Gene3D - 567 751 - -
Glsi11g0092 1656 MobiDBLite consensus disorder prediction 1221 1239 - -
Glsi11g0092 1656 ProSiteProfiles IQ motif profile. 863 890 IPR000048 GO:0005515
Glsi11g0092 1656 ProSiteProfiles IQ motif profile. 934 963 IPR000048 GO:0005515
Glsi11g0092 1656 Gene3D Myosin VI head, motor domain, U50 subdomain 440 729 - -
Glsi11g0092 1656 PRINTS Myosin heavy chain signature 220 239 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0092 1656 PRINTS Myosin heavy chain signature 557 585 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0092 1656 PRINTS Myosin heavy chain signature 277 302 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0092 1656 PRINTS Myosin heavy chain signature 324 351 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0092 1656 PRINTS Myosin heavy chain signature 610 638 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0092 1656 CDD MyosinXI_CBD 1239 1622 IPR037975 GO:0007015
Glsi11g0092 1656 SMART iq_5 885 907 IPR000048 GO:0005515
Glsi11g0092 1656 SMART iq_5 933 955 IPR000048 GO:0005515
Glsi11g0092 1656 SMART iq_5 958 980 IPR000048 GO:0005515
Glsi11g0092 1656 SMART iq_5 981 1003 IPR000048 GO:0005515
Glsi11g0092 1656 SMART iq_5 910 932 IPR000048 GO:0005515
Glsi11g0092 1656 SMART iq_5 862 884 IPR000048 GO:0005515
Glsi11g0092 1656 FunFam Myosin heavy chain 380 435 - -
Glsi11g0092 1656 Coils Coil 1005 1078 - -
Glsi11g0092 1656 SMART MYSc_2a 185 861 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0092 1656 Gene3D Kinesin motor domain 193 790 IPR036961 -
Glsi11g0092 1656 PANTHER MYOSIN 182 1587 - -
Glsi11g0092 1656 ProSiteProfiles Myosin motor domain profile. 190 860 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0092 1656 Pfam DIL domain 1475 1578 IPR002710 -
Glsi11g0092 1656 Coils Coil 1103 1179 - -
Glsi11g0092 1656 CDD MYSc_Myo11 204 848 IPR036018 -
Glsi11g0092 1656 ProSiteProfiles IQ motif profile. 911 940 IPR000048 GO:0005515
Glsi11g0092 1656 SMART DIL_2 1474 1581 IPR002710 -
Glsi11g0092 1656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 914 1011 IPR027417 -
Glsi11g0092 1656 FunFam unconventional myosin-Va 961 1009 - -
Glsi11g0092 1656 Gene3D - 380 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0092 Glsi-ChrGlsi11 690659 705409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0092 130 1656 Myosins gene family AT1G54560 85.003 0.0 2741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0092 11 690659 705409 Glsi11g0805 11 5053191 5074658 CCT
Glsi11g0092 11 690659 705409 Glsi11g0092 11 690659 705409 ECH