Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0067 ATGGCGAACCGGTGGTGGACCGACTCCGAGGGTCTTCCGGGAGTTGAAAACTCTGCCAATTCTTCCCCCATGAAAAAATTAGATCTGGGTGACACTGTAGGGAATGAAGAAGAAGAAGACAAAGAAAACAGCGATGAGCCCAAAGAAGGAGCTATTGAACTTGCCAGTAGCCGCCGCCCCAGAGGGCGTCCACCGGGCTCAAGGAACAAACCAAAACCACCTATATTTGTGACTAGGGACAGCCCTAATGCACTCCGAAGCCATGTCATGGAGATAACCAACGGAGCCGACGTTGCTGATAGCGTGCTTCAGTTCGCCAGAAGGCGGCAGAGAGGTGTCTGCGTCCTCAGCGGCACCGGCACCGTCACCAACGTTACTCTTCGCCAGCCCACTGCGCAACCTGGAGCGATTATGGCGCTTCACGGCCGCTTCGAGATACTATCATTAACGGGTTCGTTTCTGCCGGGGACGGCCCCTTCAGGCTCCACCGGTCTAACCATTTACCTGGCGGGAGGACAAGGACAAGTGGTTGGGGGTGGGGTGGTGGGTCCGCTGGTGGCATCAGGACCCGTTATGATATTGGCGGCTACATTTTCCAATGCAACTTATGAGAGATTACCCGCTAATGAGGATGAAGATCAAGTGACAGGACAGCAGCCAGGTGGGGAGGCTTCGCCGTCGTCCATTCCGGTTTATAATGTTCCTTCGAATGGGCAACAGTTGAACCATGAAGCTTATTCTTCTTGGGTTCATAGTCATGGGAGACCACCCTACTAA 777 0.5393 MANRWWTDSEGLPGVENSANSSPMKKLDLGDTVGNEEEEDKENSDEPKEGAIELASSRRPRGRPPGSRNKPKPPIFVTRDSPNALRSHVMEITNGADVADSVLQFARRRQRGVCVLSGTGTVTNVTLRQPTAQPGAIMALHGRFEILSLTGSFLPGTAPSGSTGLTIYLAGGQGQVVGGGVVGPLVASGPVMILAATFSNATYERLPANEDEDQVTGQQPGGEASPSSIPVYNVPSNGQQLNHEAYSSWVHSHGRPPY 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0067 258 Gene3D - 85 216 - -
Glsi11g0067 258 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 225 IPR014476 GO:0003680
Glsi11g0067 258 CDD DUF296 86 170 IPR005175 -
Glsi11g0067 258 FunFam AT-hook motif nuclear-localized protein 85 214 - -
Glsi11g0067 258 MobiDBLite consensus disorder prediction 1 81 - -
Glsi11g0067 258 MobiDBLite consensus disorder prediction 212 247 - -
Glsi11g0067 258 ProSiteProfiles PPC domain profile profile. 82 221 IPR005175 -
Glsi11g0067 258 MobiDBLite consensus disorder prediction 209 258 - -
Glsi11g0067 258 SUPERFAMILY AF0104/ALDC/Ptd012-like 82 212 - -
Glsi11g0067 258 Pfam Plants and Prokaryotes Conserved (PCC) domain 86 200 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0067 Glsi-ChrGlsi11 516483 517259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0067 1 258 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 57.343 2.11e-89 265