Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0062 ATGGAATCTAATGAAAACCAACTCAGCTCCTACTACCATCACCAACAGCAGCAGAACACCACCACCCCCACTAACACCGTCACCAACACTTCCTCACCAACCAATGGCCTCTTGCCAAACACGGATGGGTCCCACTTGATCTACCCTCATTCCGTGCCCTCCGCCGTCTCGTCCCAACTGGAACCCGCAAAGAGGAAGAGAGGGAGACCCAGGAAGTACGGCACCCCAGAGCAAGCTCTAGCCGCAAAGAAAGCTGCCACGTCGTCTTCTCACTCCTTTTCTCCCAGAGACAAGAAGGGCCATGGCTTGGGTAGTGCTTCTGCTTCATCTTATACCGGCGCCTCCAAGAAATCTCAGTCTTTTGCTTTAGGCAATGCAGGACAAGGCTTCACCCCGCATGTCATTACTGTTGCTGCTGGTGAGGATGTTGGCCAGAAAATTATGTTATTCATGCAACAAAGTAGGCGTGAAATGTGCATTCTGTCTGCATCTGGTTCTATCTCTAATGCATCTCTTCGTCAGCCAGCAACCTCAGGAGGCAATATTACATATCAGGGTCGGTATGAGATTATTTCACTTTCTGGTTCCTATGTCCGTACTGAACTTGGAGGGCGGACTGGTGGTCTCAGTGTATGCTTATCTAATTCTGATGGCCAAATCATAGGTGGAGGAGTTGGTGGACCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGTACATTTTTTATCGACTCCAAGAAGGATGCTGGTGCTGTTGTAAAAGGTGATGCTTCTGCTAGCAAGTTGCCATCACCAGTTGGTGAATCAGTATCAAGTTTAGGTTTTCGCCCTGCAGTTGACTCTGCAAGTGGGAATCCAATCCGGGGAAATGATGAGCATCAAGCTATTGGAGGAAGTCATTTCATGATTCAACAGTGTGGTGTACATGTGAGGCTCACCGACTGGGGGGCTCATCTGGATTCAAGAAATGCTGGCTATGAACTGACAGGAAGAACAGGCCATGGGGCGCACCAAAGTCCTGAGAATGGGGACTATGAGCGTATTCCTGATTGA 1056 0.4924 MESNENQLSSYYHHQQQQNTTTPTNTVTNTSSPTNGLLPNTDGSHLIYPHSVPSAVSSQLEPAKRKRGRPRKYGTPEQALAAKKAATSSSHSFSPRDKKGHGLGSASASSYTGASKKSQSFALGNAGQGFTPHVITVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGNITYQGRYEIISLSGSYVRTELGGRTGGLSVCLSNSDGQIIGGGVGGPLKAAGPVQVIVGTFFIDSKKDAGAVVKGDASASKLPSPVGESVSSLGFRPAVDSASGNPIRGNDEHQAIGGSHFMIQQCGVHVRLTDWGAHLDSRNAGYELTGRTGHGAHQSPENGDYERIPD 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0062 351 Pfam Plants and Prokaryotes Conserved (PCC) domain 132 242 IPR005175 -
Glsi11g0062 351 MobiDBLite consensus disorder prediction 1 111 - -
Glsi11g0062 351 ProSiteProfiles PPC domain profile profile. 126 263 IPR005175 -
Glsi11g0062 351 Gene3D - 132 254 - -
Glsi11g0062 351 MobiDBLite consensus disorder prediction 329 351 - -
Glsi11g0062 351 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 14 266 IPR039605 GO:0003680
Glsi11g0062 351 SUPERFAMILY AF0104/ALDC/Ptd012-like 128 242 - -
Glsi11g0062 351 CDD DUF296 131 242 IPR005175 -
Glsi11g0062 351 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0062 Glsi-ChrGlsi11 490025 494328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0062 9 351 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 52.094 6.67e-98 294