Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0046 ATGAATTGCTTCCCCTGTTTCGGCTCTCACAAAAGCAAGAAAAGCCATTCCAAGAGGGAGTATGGGTCTCCACCTCACGAAAACGTGACCTCAACAACCCCCGATATCAAGAAACCAAAGGGAGATGATCCGGCCCACGTTAATATTGCAGACATTCAAGCGCAGACTTTCACTTTCCGTGAGCTAGCAACTGCAACAAAGAATTTCCGCCACGAATGCCTGCTCGGTGAGGGTGGCTTTGGCAGAGTCTACAAGGGCACGCTTCCTGCAACCGGGCAGGTGGTAGCTGTCAAGCAACTTGACAGAAATGGGCTGCAAGGCAATAAAGAATTTCTGGTTGAGGTTTTGATGCTTAGTCTCTTGCACCATGAAAGTCTGGTCAATCTCATTGGTTATTGTGCCGACGGGGATCAACGTCTTTTGGTGTATGAATTCGTGTCAGGGGGTTCTCTAGAAGAGCATATTCTTGGGAATAGATCAGATATGCGTCCTTTAGATTGGTTCACGAGAATGAAAATAGCATCGTCTGTTGCCTGTGGACTAGAGTACTTGCATGACAAGGCCAATCCCCCCGTCATATACCGGGACTTGAAATCTTCAAACATCTTGCTGGATGATGATCTACATCCTAAACTCTCTGACTTTGGACTGGCCAAGCTTGCTGGGGGAGATAAGATGAACCCTGCACCCTCAAGAGTTATGGGTACCTATGGATATTCTGCTCCAGAGTATGTAAGCAAGGGTCACCTCACCTTGAAATCTGATGTGTACAGTTTTGGAGTTATCTTGCTAGAGCTCATAACCGGACGCCGAGCCATTGACACCACGAAGCCAAACGATGAGCAAAACCTAGTTACATGGGCACAACCCCTATTCAGAGACCCAAAAAGATTTCCGGAAATGGCGGATCCAGTTCTTGGAAAACATTTTCCAGAAAAGGATCTCAATCAAACCGTTGCAATAGCAGCCATGTGCCTGCAGGAGGAAGCCGCTGCCCGTCCTTTGATGAGTGACGTTGTAACTGCTCTGAGTTTCCTTTCTATGGTTCCTCCAGAGGTTATTCCTGCCTCTCTTTCGCATGCCACCTTGCCCTCTGAGGAGAGTAATGCCGGTGAAAGTGAAGCCGAAACTGGAATGGTATCCGACGATGAGGGTTCAAGTTATGAGGACGGTAAAAATGACTGTGAGGAGTCTTACTCCAAATCAAGCAGCAAAAGTAGCAAGAGATCAAGGAATTCTAATTCGAGTCGCAGAAACAGCATTGGTTCAGAAGAAGGAAGCGTTTGTTGCAGCCAGAGAAGCAGGAATGAAACAGAGACACAAAGCAGTAGGACAGCGCATGGGGGAATTGGTAATGTGAGCAGCAGATCAAAAGAGAGAAATGAGGAGAGTGAAAGGAGGGCATCGTTTGGGAGTAATTGCAGTGATTCGATTGAGCGTAGTGGCAGCAGAAATAAATCTCTTGGTCTTATGAGGAGCGGAAGTGCACACTTGGACGACAACAACGGCAGCATGAGGTCTCACGAAGCAAATGGAAAACGTTTGGATCATGTAAGCAGCAGGCCATCAGATGAGGAAAGACTTCTTTTGAGATGA 1596 0.4718 MNCFPCFGSHKSKKSHSKREYGSPPHENVTSTTPDIKKPKGDDPAHVNIADIQAQTFTFRELATATKNFRHECLLGEGGFGRVYKGTLPATGQVVAVKQLDRNGLQGNKEFLVEVLMLSLLHHESLVNLIGYCADGDQRLLVYEFVSGGSLEEHILGNRSDMRPLDWFTRMKIASSVACGLEYLHDKANPPVIYRDLKSSNILLDDDLHPKLSDFGLAKLAGGDKMNPAPSRVMGTYGYSAPEYVSKGHLTLKSDVYSFGVILLELITGRRAIDTTKPNDEQNLVTWAQPLFRDPKRFPEMADPVLGKHFPEKDLNQTVAIAAMCLQEEAAARPLMSDVVTALSFLSMVPPEVIPASLSHATLPSEESNAGESEAETGMVSDDEGSSYEDGKNDCEESYSKSSSKSSKRSRNSNSSRRNSIGSEEGSVCCSQRSRNETETQSSRTAHGGIGNVSSRSKERNEESERRASFGSNCSDSIERSGSRNKSLGLMRSGSAHLDDNNGSMRSHEANGKRLDHVSSRPSDEERLLLR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0046 531 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Glsi11g0046 531 Gene3D Transferase(Phosphotransferase) domain 1 146 349 - -
Glsi11g0046 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Glsi11g0046 531 MobiDBLite consensus disorder prediction 385 404 - -
Glsi11g0046 531 SMART serkin_6 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0046 531 SUPERFAMILY Protein kinase-like (PK-like) 55 368 IPR011009 -
Glsi11g0046 531 ProSiteProfiles Protein kinase domain profile. 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0046 531 Pfam Protein kinase domain 73 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0046 531 PANTHER OS07G0668900 PROTEIN 3 348 - -
Glsi11g0046 531 FunFam Serine/threonine-protein kinase PBS1 146 358 - -
Glsi11g0046 531 MobiDBLite consensus disorder prediction 1 44 - -
Glsi11g0046 531 FunFam Serine/threonine-protein kinase PBS1 42 145 - -
Glsi11g0046 531 MobiDBLite consensus disorder prediction 362 531 - -
Glsi11g0046 531 MobiDBLite consensus disorder prediction 405 455 - -
Glsi11g0046 531 CDD STKc_IRAK 75 343 - -
Glsi11g0046 531 MobiDBLite consensus disorder prediction 502 531 - -
Glsi11g0046 531 Gene3D Phosphorylase Kinase; domain 1 31 145 - -
Glsi11g0046 531 MobiDBLite consensus disorder prediction 470 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0046 Glsi-ChrGlsi11 342047 344083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0046 1 369 Glycoside Hydrolase AT3G07070 65.526 1.19e-169 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Glsi11g0046 Pkinase 3.6e-47 CL0016