Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0040 ATGCCACCGGAGCATCGCTTGGAATCGGCCAACGGGCTGCAACTCCCACCGGGGACCCAGGAAATACAGTTCCAAGGATTGGGGTTTTATCAGCAGCAAGGAATTCTGGGGATTCATCCTAACCCGCATGACACGGAAGATTCATCATCCTCCTGCAGGAATGTTAGGATGAGAATGACATTGCAAGACAACAGCCTGCCAGTGGCATATGGGGAGCTTCGGCTAGGCAGCTGCAGTGAAAACCCTAACCCAAGGCCTATCAGAAACTCAGTTTATGATCCAATGTATGAAGCAATGGGGTTACCTGTGGACCCCCATTTGAGGATGTTTATTGCCAAGCGTAACCAAGACACACGCAATTTCTTTATCTGCTCTCCTCCCAATCTTTCTATCAAACAATCAATGGCTCCTCATTTTGCTCTGCTTCGTGCCCCGTTTTCCATTTGCCCGCTCAAATCCGCCACCTCTTTTTCTTCCTATCCAACCTCCGCACCGCCAACAGCATTTTCGGTCATCGCCTGCTCCCCTTCTCCTGAACGAAAACGACGAGCTCCGTTGTCTTCTCGGATTGCCTCCGGAGAATTTACCGTCCAACAGTCCGGTTTCCCGTCTGTATTAAAGAAGAGTTTGTTAAAGCTGGGCATGCCCGAGGGGGTTCTGGAATTTTTATTTCCTGAAAATTCCATAATTCCCGAGGCAAAAGGATCAGTTAAAGCCATTCGAAGTGAGGCCTTCTTCATTCCCTTGTATGAACTTTACCTCACATACGGTGGAATTTTCAGACTGACCTTTGGACCGAAGTCTTTTTTGATAGTATCTGATCCGTCCATTGCAAAACACATCTTGAGAGACAATGCAAAGGCTTATTCAAAGGGTATCTTGGCTGAGATCCTGGACTTTGTAATGGGGAAAGGGCTCATCCCAGCTGATGGGGAAATATGGCGAGTTAGACGACGTGCTATTGTCCCAGCATTGCATAAGAAGTATGTAGCAGCTATGATTAACCTTTTTGGACAAGCTACTGATAGGCTTTGCAAGAAGCTAGATGCTGCTGCATCTGATGGGGAAGATGTTGAGATGGAATCACTTTTCTCTCGTTTAACTTTGGATATTATTGGCAAGGCAGTATTTAATTATGATTTTGATTCTTTAACAAATGATACTGGTATAGTTGAGGCTGTTTATACTGTACTGAGAGAAGCAGAAGATCGAAGTGTTGCTCCAATCCCATTCTGGGAGATCCCAATATGGAAAGACATTTCGCCACGTCAAAGAAAGGTTGCTTCAGCTCTCAAACTGGTCAATGATACACTTGATGATCTGATATCAATATGCAAGAGAATGGTAGATGAAGAAGAGTTACAGTTTCATGAGGAGTACATGAATGAAAAAGACCCTAGTATTCTGCACTTCTTGTTAGCATCTGGAGATGATGTGTCAAGCAAACAACTTCGTGATGATTTAATGACAATGCTTATTGCTGGACATGAAACATCAGCTGCTGTTTTGACTTGGACCTTTTATCTTCTATCTAAGGAGCCTAGTGTCATGTCCAAGCTTCAGGAAGAGGTTGACGCTGTACTAGGAGATCGATTTCCAACTATTGAAGACATGAAGAGACTCAAATATACAACTCGAGTGATCAATGAGTCATTGAGGCTCTACCCACAACCACCTGTGTTAATTCGTCGCTCTCTTGAGGATGATGTGCTTGGAGAGTATCCTATAAAAAGGGGTGAAGATATTTTTATATCTGTCTGGAGCCTGCATCGCAGTCCAAAACTGTGGGATGAAGCTGATAAGTTTAAACCTGACAGATGGGCCTTAGATGGACCTAATCCTAATGAGACAAATCAAAACTTCAAATATCTTCCATTTGGTGGAGGTCCACGAAAATGTGTAGGTGATATGTTTGCTTCATATGAGACTGTGGTAGCACTTGCAATGCTTGTTAGGCGGTTCAACTTTCACTTGGCCCTTGGAGCTCCACCAGTTGAGATGACAACTGGAGCAACAATTCATACAACACAAGGATTGAAGATGACTGTAACACGCAGAATGAAACCTCCTATTGTGCCATCACTGCAGATGCCATCCTTAAGCCTTTCAGATAAGGATGCAGTAAGCCTTTCAGATAAGGATTCAGTAAGTCAGAAAGATCAAGTTTATCCTGCTCACTCCTGA 2184 0.44 MPPEHRLESANGLQLPPGTQEIQFQGLGFYQQQGILGIHPNPHDTEDSSSSCRNVRMRMTLQDNSLPVAYGELRLGSCSENPNPRPIRNSVYDPMYEAMGLPVDPHLRMFIAKRNQDTRNFFICSPPNLSIKQSMAPHFALLRAPFSICPLKSATSFSSYPTSAPPTAFSVIACSPSPERKRRAPLSSRIASGEFTVQQSGFPSVLKKSLLKLGMPEGVLEFLFPENSIIPEAKGSVKAIRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNAKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPALHKKYVAAMINLFGQATDRLCKKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPFWEIPIWKDISPRQRKVASALKLVNDTLDDLISICKRMVDEEELQFHEEYMNEKDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVMSKLQEEVDAVLGDRFPTIEDMKRLKYTTRVINESLRLYPQPPVLIRRSLEDDVLGEYPIKRGEDIFISVWSLHRSPKLWDEADKFKPDRWALDGPNPNETNQNFKYLPFGGGPRKCVGDMFASYETVVALAMLVRRFNFHLALGAPPVEMTTGATIHTTQGLKMTVTRRMKPPIVPSLQMPSLSLSDKDAVSLSDKDSVSQKDQVYPAHS 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0040 727 FunFam Carotene epsilon-monooxygenase, chloroplastic 231 688 - -
Glsi11g0040 727 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 626 635 IPR017972 GO:0005506|GO:0016705
Glsi11g0040 727 PANTHER CYTOCHROME P450 FAMILY 4 249 686 - -
Glsi11g0040 727 Gene3D Cytochrome P450 232 692 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 Pfam Cytochrome P450 249 670 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 PRINTS E-class P450 group I signature 623 633 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 PRINTS E-class P450 group I signature 253 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 PRINTS E-class P450 group I signature 545 563 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 PRINTS E-class P450 group I signature 633 656 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 PRINTS E-class P450 group I signature 503 529 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 PRINTS E-class P450 group I signature 585 609 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 PRINTS E-class P450 group I signature 483 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 PRINTS P450 superfamily signature 546 557 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 PRINTS P450 superfamily signature 633 644 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 PRINTS P450 superfamily signature 494 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 PRINTS P450 superfamily signature 624 633 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 SUPERFAMILY Cytochrome P450 242 686 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g0040 727 CDD CYP97 247 680 - -
Glsi11g0040 727 MobiDBLite consensus disorder prediction 703 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0040 Glsi-ChrGlsi11 298933 305671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0040 179 709 Cytochrome P450 AT1G31800 80.261 0.0 885