Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0032 ATGGTTTCATCCTTGAGTGTTTCGTTGTTTCCCTTCACCACACAAAACGGTATCTCTCGGTCTACTAAATTTGCAGCTGCCAATGGAAGGACGATAAGTACATTCTCTATTAAGCAGAGTAACGAGCATAGAAAGGTTGTTTGTGCTTGCGTGGCTCCTCCGCGAAACTTGATGGGCGATGAATCATCGGCAATTAAATTCAATGGTTCTTCTAAATCAGAACATTTACACACAAAACGGGATCCTGAGGATGATTCTGGTGTTCTTATTGAGTGTAGAGAAGTCTATAAATCTTTTGGGGAAAAGAAAGTCCTAAATGGTGTGAGCTTCAAGATCAGACATGGTGAAGCTGTTGGAATAATTGGTCCCTCTGGAACTGGAAAATCTACTGTTTTGAAGATTATTGCAGGGCTGCTTGCTCCAGACAAGGGGGAGGTTTATATTCGAGGTAGAAAGAGAGCTGGTTTGATAAGCGATGAGGAGATATCTGGTCTTCGGATTGGATTAGTGTTCCAAAGTGCGGCACTTTTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCTCTTGTATGAAAACTCAAGTATGTCTGAGGATCAAATTTCAAAGCTTGTCAAGGAAAGCTTGGCCGCAGTTGGATTAAAGGGTGTTGAGGATCGGCTGCCTTCTGAGTTGTCAGGTGGGATGAAAAAACGAGTTGCCCTAGCTCGGTCTATTATTTATGACACTACAAACAATTCAATAGAGCCAGAGGTGCTCTTGTATGATGAACCAACTGCTGGACTTGATCCCATAGCTTCTACTGTAGTTGAGGATCTGATACGCTCTGTCCACATAAAAGGACGAGATGCCGTTGGAAAACCTGGGAAGATTGCATCTTATGTGGTTGTCACTCACCAACATAGTACCATTAAAAGAGCTATTGATAGGTTGTTGTTTCTACACAAGGGCAAGATTGTCTGGGAAGGAATGACTCACGAATTTACTACATCAACAAATCCAATTGTTCAACAGTTTGCATCTGGTAGCCTGGACGGGCCAATAAAATATTAG 1053 0.4198 MVSSLSVSLFPFTTQNGISRSTKFAAANGRTISTFSIKQSNEHRKVVCACVAPPRNLMGDESSAIKFNGSSKSEHLHTKRDPEDDSGVLIECREVYKSFGEKKVLNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSSMSEDQISKLVKESLAAVGLKGVEDRLPSELSGGMKKRVALARSIIYDTTNNSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDAVGKPGKIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHEFTTSTNPIVQQFASGSLDGPIKY 350
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0032 350 Pfam ABC transporter 105 260 IPR003439 GO:0005524
Glsi11g0032 350 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524|GO:0016887
Glsi11g0032 350 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 341 IPR003439 GO:0005524
Glsi11g0032 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 331 IPR027417 -
Glsi11g0032 350 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 4 350 - -
Glsi11g0032 350 CDD ABC_Org_Solvent_Resistant 90 339 - -
Glsi11g0032 350 Gene3D - 75 342 IPR027417 -
Glsi11g0032 350 SMART AAA_5 114 318 IPR003593 GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi11g0032 Glsi-ChrGlsi11 251365 255612 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0032 96 334 Calmodulin-binding Proteins AT2G36910 26.693 2.62e-14 72.4