Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0016 ATGGGGTCCTGCTTCTCTGCAGAAAGCAGGAGCCCGCTTCCCACTTCACCTTTGGGTATCAGAAAACGGCTGCATAGAATTCCGGGGAGGATGTTTCTAAATGGATCTAGTGATGTTGCGTCCTTGTTTACTCAACGAGGCAAGAAAGGCACTAATCAAGATGCCATGATTGTTTGGGAGAATTTTTGTTCTAGAAAAGATACTGTTTTTTGTGGAGTTTTTGATGGCCATGGTCCATTGGGTCACATGGTTGCAAAAAGAGTGAGGGATTCTCTTCCTCGAAAACTCAGTGCACATTGGGAACTTAATGTCTCTGGTGATGGTGAGGAAGTCCTTAAGGAGATTAGCATTAATAATGTAGGAAGCTTGAACTCGGAAGAGGCAGCCTTTGTATCTGCTGATGAGGAATCCAGGGCATCCACTGATGCTGAGGAAAAGGAAAAACACCCTGAGATCTTTCGGAAACTTAAAGAGTCATTTTTGAAGGCATTTAAAGTTATGGACAGGGAACTGAAGATGCACCCAAATATTGATTGCTTTTGTAGTGGCACAACAGCAGTAACTCTGGTTAAGCAGGGTCAAGATCTTGTTATTGGAAATGTTGGCGACTCTAGAGCTGTGCTCGGTACAAGAGACAAAGATGATTCTCTTGTTGCAGTCCAGTTAACTGTGGATCTAAAACCCAACCTTCCAGCGGAAGCAGAGAGAATTCGCAAATGTAAAGGGCGTGTTTTTGCTCTTCAAGATGAACCTGAGGTTGCTCGAGTGTGGTTGCCAAACAATGACTCCCCTGGCCTAGCCATGGCGCGGGCATTTGGAGATTTTTGTCTAAAAGATTTTGGACTGATATCTGTTCCAGAGATATCGTATCATCACCTCACTGAAAAGGATGAATTTGTTGTCTTGGCAACGGATGGGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTAGAGATTGTAGCAGGGGCCTCAACGCGTTCTTCGGCAGCTCGAGCACTGGTTGAATCAGCAGTTCGAGCTTGGAGATATAAATATCCTACATCCAAAGTGGATGACTGTGCAGTGGTTTGCCTCTTCCTAGACCCAGACTCCCATATTTCTGGTACATCCAAATCCGACCAGCCTAGTGATGAGGAAGATGATTCTGGAGCAACTGTTCTGGAAAGGTCAGGAACTTGCCGGGAAGTAAGCAACGCAAATGATTCGGCCAAGCAAGAAAAGGGATATTTAAGTAAAGATTATTTCAACATTATAGATATTACATTTTGCTTTTGCTCGTTCCTTCTTACGTTGTTCCCAGTTCCTTTGATCATTATTGTTTTTCCTCTTTGTTATGTTAAATGTGAATTAGAAATTGGAGCAGAAGAACTTTGGCTGTAG 1380 0.4341 MGSCFSAESRSPLPTSPLGIRKRLHRIPGRMFLNGSSDVASLFTQRGKKGTNQDAMIVWENFCSRKDTVFCGVFDGHGPLGHMVAKRVRDSLPRKLSAHWELNVSGDGEEVLKEISINNVGSLNSEEAAFVSADEESRASTDAEEKEKHPEIFRKLKESFLKAFKVMDRELKMHPNIDCFCSGTTAVTLVKQGQDLVIGNVGDSRAVLGTRDKDDSLVAVQLTVDLKPNLPAEAERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEISYHHLTEKDEFVVLATDGIWDVLSNKEVVEIVAGASTRSSAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDPDSHISGTSKSDQPSDEEDDSGATVLERSGTCREVSNANDSAKQEKGYLSKDYFNIIDITFCFCSFLLTLFPVPLIIIVFPLCYVKCELEIGAEELWL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0016 459 FunFam probable protein phosphatase 2C 33 34 363 - -
Glsi11g0016 459 Pfam Protein phosphatase 2C 144 339 IPR001932 -
Glsi11g0016 459 CDD PP2Cc 39 360 IPR001932 -
Glsi11g0016 459 PANTHER PROTEIN PHOSPHATASE 39 358 IPR015655 GO:0004722|GO:0006470
Glsi11g0016 459 SUPERFAMILY PP2C-like 38 361 IPR036457 -
Glsi11g0016 459 ProSiteProfiles PPM-type phosphatase domain profile. 39 360 IPR001932 -
Glsi11g0016 459 Gene3D - 36 361 IPR036457 -
Glsi11g0016 459 SMART PP2C_4 28 358 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0016 Glsi-ChrGlsi11 166296 170279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0016 1 394 PP2C-type Phosphatase Gene Family AT3G02750 60.587 1.84e-180 513