Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2906 ATGCACCGACAGCCAGATCATGTCATGGCTTTCTTGCTTGCTGAGCTGGGTACAAGTGGTTCACTAGATGGACAGCAGAGGTTGGTTGTGAAGGGAAGATTTGCGCCAAAGAACTTTGAAGGAATTTTGCGGCGATATATCAATGAGTATGTCATTTGCATTGGATGCAAGAGTCCAGACACAATACTTACAAAGGAGAACCGTTTGTTCTTTCTCCGATGTGAGAAGTGTGGATCAGGAAGGAGGCGGCTCTCAATATCCATTTTGCCAGGGCATAGAATTATGGACAAGTCAGCTCGCCCTAGTCCGATATGGTTGGGCAGGCAAGTGTCATGTAGCCCACCGCACTCTAAAGCGGAATATGGTTTAGCCAATTGA 378 0.4683 MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICIGCKSPDTILTKENRLFFLRCEKCGSGRRRLSISILPGHRIMDKSARPSPIWLGRQVSCSPPHSKAEYGLAN 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2906 125 Gene3D - 1 83 - -
Glsi10g2906 125 Pfam Domain found in IF2B/IF5 1 79 IPR002735 GO:0003743|GO:0006413
Glsi10g2906 125 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 1 53 IPR016189 GO:0003743|GO:0006413
Glsi10g2906 125 SMART eIF2Bneu4 1 80 IPR002735 GO:0003743|GO:0006413
Glsi10g2906 125 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 50 80 IPR016190 GO:0003743|GO:0006413
Glsi10g2906 125 FunFam Eukaryotic translation initiation factor 2 subunit 1 86 - -
Glsi10g2906 125 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 82 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2906 Glsi-ChrGlsi10 56581432 56582758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2906 1 81 Eukaryotic Initiation Factors Gene Family AT5G20920 91.358 9.01e-52 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g2906 10 56581432 56582758 Glsi10g2906 10 56581432 56582758 ECH