Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2895 ATGGCTGGGATTGATGATAATGTTCCACTAACTAGTGAGTGGGGTCATCCTAGTCCGAGTCCAAGAACCTTTTTCTCTAGAATGCTAGGTGAAGATAATGTCACAAGACCGATCTCAGAGCCTTCCGGAAGTGCTAGAACTGAGGAATCCTTTCTGGGAACTCAAGAGCTCATTATGACAGGAAAATTCAACATAAAAGATACGGCACATGATGGAGCTTCTGGTGGCCAATTAACTGACACAAGTTCTTTGTCAGAGCAAAAGTCAAGTTCACGGGGAGGTCTTGTGGAAAGAATGGCTGCTAGAGCTGGATTTAATGCCCCAAGGTTGAATACAGAAAGCATTAGATCAGCTGACCTTTCACTTAATTCCAACAATCGATCTCCTTACTTAACCATACCACCTGGGCTCAGTCCAACTACACTTTTAGATTCTCCTGTTTTCCTTTCAAATTCACTGGCACAACCATCTCCGACAACTGGAAAGTATCCATTTGTCTCAAATGGAAACTTCCGGTCCTCAGAACCAAACTCTGGTGCTCCTGAAAAAAGTAAAGATAATTGCTTTGATGACATCTATGCATCATCGTTTGCTTTCAAGCCTACAGCAGATTTGGGCTCTTTTTATCATGGTGCTGCTAGAAAATTGAATCCAACACTACCTGAACAATTTCTTACCAATAATGAGGTCTCAGCTCAGTCAAAAATTTATTTTCCATCTCAGTGTGCTGATACAGTCAAAATTCAAACTGAGATTAAAAGTGGCCTCCAGCTTCAGTCTGATTTCATTGACTCACCCACCCAAAATGATAACAGAGCACCACTTGAGGAGCAAGCAAATGAAGAGGGAGATCAGAGAGGAAATGGAGACTCACTGGCTACTGGTGTTGGTGGCACACCATCTGAAGATGGATATAACTGGAGAAAATATGGACAAAAACAAGTTAAAGGTAGTGAGTATCCACGGAGTTACTACAAGTGTACACATCCAAATTGTCAGGTTAAGAAGAAAGTAGAACGATCCCATGAGGGCCACATAACCGAAATCATCTACAAGGGGACTCACAACCATTCAAAACCTCCTCCAAGTCGCAGATCAGCCATAGGGTCAGTTAACCCTCTTACTGACATCCAAGCTGACAATTCTGAGAATGTTGAACCACAGGCTGGTGGTGATGGTGAACTGGGCTGGGCTAGTGCACAAAAGGGAAATACAGCTAGAGCTGCTGATTGGAAGCATGACAACGTCGAGGTGACATCATCAGCATCTTTAGGCCCTGAATTTTGCAATCAGTCCACCAATTTGCAGACTCAGAATGGTACTCACTTTGAATCAGGAGATGCAGTTGATGGCTCATCTACTTTTTCTAATGATGAAGATGAGGATGATAGGGGCACTCACGGAAGTGTATCATTAGGTTATGAAGGGGAAGGAGATGAATCAGAGTCTAAAAGAAGGAAACTGGAATCTTATGCAACAGAATTGAGTGGAGCCACTAGAGCTATCCGTGAACCCAGAGTTGTTGTCCAGACTACCAGCGAAGTAGATATCCTTGATGATGGATATCGTTGGCGTAAGTATGGGCAAAAAGTTGTAAAAGGAAATCCCAACCCAAGGAGTTATTACAAGTGCACCAATGCAGGCTGCAGCGTAAGGAAGCATGTGGAGAGAGCATCACATGACCTAAAATCCGTTATAACTACATATGAGGGAAAGCACAATCACGATGTTCCTGCTGCTCGCAATAGCAATCAAGTCAATGCTGCCACTTCTAGCACTGTACCTGCCCAAGCTTCCGCAGTTATTCAAACCCATGCTCATAGAGCTGAACCATCACAAGTTCACGACGGCATTGGAAGGCTTGATAGGCCTGCTCTGGGATCATACCTACCTGGGAGGCAGCAGCTAGGGCCTCCCCATGGCTTTTCCTTTGGAATGAATCAACCAGGCTTGCCCAATCTGGCAATGGCAGGATTGGGCCCTGTCCACTCGAAGCTTCCTGTCATGCCTGTTCATCCATTCTTGACACAACAACGCCCTGGAAATGAAATGGGATTCATGTTGCCAAAAGGAGAACCAAATTCAGAGCCTATTCCAGACCGCGGGCTGAACCTGCCTAGTGGCTCATCAGCATATCAAGAAATCATGAATCGGATGCCCCTTGGACCTCATATGTAA 2178 0.4467 MAGIDDNVPLTSEWGHPSPSPRTFFSRMLGEDNVTRPISEPSGSARTEESFLGTQELIMTGKFNIKDTAHDGASGGQLTDTSSLSEQKSSSRGGLVERMAARAGFNAPRLNTESIRSADLSLNSNNRSPYLTIPPGLSPTTLLDSPVFLSNSLAQPSPTTGKYPFVSNGNFRSSEPNSGAPEKSKDNCFDDIYASSFAFKPTADLGSFYHGAARKLNPTLPEQFLTNNEVSAQSKIYFPSQCADTVKIQTEIKSGLQLQSDFIDSPTQNDNRAPLEEQANEEGDQRGNGDSLATGVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGTHNHSKPPPSRRSAIGSVNPLTDIQADNSENVEPQAGGDGELGWASAQKGNTARAADWKHDNVEVTSSASLGPEFCNQSTNLQTQNGTHFESGDAVDGSSTFSNDEDEDDRGTHGSVSLGYEGEGDESESKRRKLESYATELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCSVRKHVERASHDLKSVITTYEGKHNHDVPAARNSNQVNAATSSTVPAQASAVIQTHAHRAEPSQVHDGIGRLDRPALGSYLPGRQQLGPPHGFSFGMNQPGLPNLAMAGLGPVHSKLPVMPVHPFLTQQRPGNEMGFMLPKGEPNSEPIPDRGLNLPSGSSAYQEIMNRMPLGPHM 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2895 725 Gene3D WRKY domain 291 361 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi10g2895 725 MobiDBLite consensus disorder prediction 156 181 - -
Glsi10g2895 725 FunFam WRKY transcription factor 33 505 571 - -
Glsi10g2895 725 MobiDBLite consensus disorder prediction 156 184 - -
Glsi10g2895 725 ProSiteProfiles WRKY domain profile. 513 578 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g2895 725 Pfam WRKY DNA -binding domain 519 575 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g2895 725 Pfam WRKY DNA -binding domain 302 357 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g2895 725 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 143 595 IPR044810 GO:0003700
Glsi10g2895 725 ProSiteProfiles WRKY domain profile. 302 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g2895 725 MobiDBLite consensus disorder prediction 74 92 - -
Glsi10g2895 725 SMART WRKY_cls 518 577 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g2895 725 SMART WRKY_cls 301 359 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g2895 725 FunFam WRKY transcription factor 293 361 - -
Glsi10g2895 725 SUPERFAMILY WRKY DNA-binding domain 299 360 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi10g2895 725 MobiDBLite consensus disorder prediction 68 95 - -
Glsi10g2895 725 MobiDBLite consensus disorder prediction 1 48 - -
Glsi10g2895 725 MobiDBLite consensus disorder prediction 262 307 - -
Glsi10g2895 725 MobiDBLite consensus disorder prediction 382 487 - -
Glsi10g2895 725 Gene3D WRKY domain 505 571 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi10g2895 725 MobiDBLite consensus disorder prediction 416 453 - -
Glsi10g2895 725 SUPERFAMILY WRKY DNA-binding domain 510 578 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2895 Glsi-ChrGlsi10 55782594 55786145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2895 1 720 WRKY Transcription Factor Family AT5G56270 50.978 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi10g2895 WRKY 2.4e-24 CL0274