Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2884 ATGATCGCTCAAATCGTTTTTGTCTACCAAGCAAACCTTGATTCCTCCAATCGCCATCCAAACCCAACTGATGTTATCAAAGAAGCCCTCTCAAAAGCTTTGCTTCACTATTTCCCTCTTGCTGTAACGCTAATCAGGCACGATGATGGAAAACTTATAATCAATTGTAATGATGATGGAGTGACCAAATATCTCTGTGGGGGTTTCATGATTGGATTGGGCATTTCACACTCTGTTGTTGATGAGTTTGGCATAGCTCAGTTCCTTCGAGCCATGGCTAAACTTCCAAGTGGAAAAGATGAGCCCTCAGTGAAACCTGTGTGGGAAATAGGGAGACTAGTGGGGAAAATTACTAAAGAGCTAATCCAATATCCCTGGATAAGATTTGCACTACTACTTGACCATTTTTGTCAACTGCAGACCTTTTGCATGAATGCCTTAAGGTTTACGGCAAGGGCATAA 462 0.4199 MIAQIVFVYQANLDSSNRHPNPTDVIKEALSKALLHYFPLAVTLIRHDDGKLIINCNDDGVTKYLCGGFMIGLGISHSVVDEFGIAQFLRAMAKLPSGKDEPSVKPVWEIGRLVGKITKELIQYPWIRFALLLDHFCQLQTFCMNALRFTARA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2884 153 PANTHER ACYL TRANSFERASE 4 61 116 - -
Glsi10g2884 153 Gene3D - 63 120 IPR023213 -
Glsi10g2884 153 Gene3D - 1 62 IPR023213 -
Glsi10g2884 153 Pfam Transferase family 61 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2884 Glsi-ChrGlsi10 54974232 54974764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2884 25 84 Monolignol Biosynthesis Gene Families AT5G48930 43.333 2.96e-08 49.7