Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2870 ATGACTTCTTCAATGGGATGGTGGCTTCTTAGACAAGACGCTGCCTGCATGCCTCCACAAGAGGACGGCAACGACTTCTTCCTCGCAATAACGGCTTCTTCAACTATACACGCATTCCTTGTGGTACGTACGGTGGTTAAGGGTGAGATATTTTGGGATGGTTTAGGGAGGTTAGCTAAGGGCTTTGAGGTTTTGAGCCACCCGAATCAATATCAGGACAAGATGGTCAAGGCAATGAAGGTTGAGTTTATCTCCAAAGAAACGATAAAACCATCATCTCCAACTCCCCAACACCTTAGAACTTTAAAACTGTCTTTCATAGACCAGCTTGCTCCTGTAATGCATGTCCGAATTCTCTTTTTCTTCCCCATTGATGGCGACCTCAAAGATCACCGCCATCCTGTTGACGTTGCTGATAAGTCTCAGAAGCTAAAAACATCTTTATCTGAGACTCTAACCCATTTCTACCCTCTCGCTGGCAGAGTCAAAGACAATGCAGGAATTGAATGTAACGATGCTGGTGTGGAGTTTGCTGAAGCTCGAGTCCATGGCTTCCTCTCTGACATTCTTAAACAACCAGATGCCAATTCAGGACACCAGTTTGTACCCAATGATGTGTTCCCTCACGCAACCCCTGGGACTTTATTACAAGTGCAAGCCAATTTCTTCGATTGTGGGGGCTTAGCAATTGGTGTCTCCATCTCCCACAAGATCGCTGACGCATCCACAATTGGTTCTTTCATCAAAGCATGGTCTGCAATTGCTCTAGGATGCATGACCGAGGCTTTGGTTCCAAAATATATTCTTGGGTCTCTTTACCCTTCAGTGGATTTTCCCGTTGTTCTACCAGCTGTTGAGTTCAGACAGCTCAAATGCATTACAAAAAGGTACGTGTTCGATTCCTCAAAGATAACGAAACTGAAGACTAAAGTTGCTAGCACAATGGTACAGCGGCCAACGCGAGTTGAGGCTGTTTTGGCACTCATTTGGAAATGTGCAACAACTGCGTCAAGAACAACCATGGGAATGACCACTAGACCATCCCTGTTGTCTCAAATGGTGAATATTCGTAAAAGGGTAGCTCCACCCTTACCTGAAAGTTCTGTAGGTAACTTATTAGGTCACTTTACAGTACAGCCAGAGGAGAGTGAGATGGAGTTGCAAAGCTTGGTTGTTAAGCTGAGGAAAGGTTTGGAAGAATTTTCCAAGATCTATGTCCAGAAACTTCAAGAAGGCAATGCATTCCTTACCGTTTGTGAGGGTTTGAAGGACTTGGAACTTGTATACAAAGATGGTATAGATTTCTACGGTTGCACAAGCTGGTGCCGCTTTTCATTTTATGATGCTGATTTTGGGTGGGGAAAGCCAAAATGGGTGAGTGTTCCTTCTTTGAGTATCAAGAATTCCTTCGTTCTGATGGATACAAGTGACGGCAAGGGAATAGAAGCATGGGTGACCTTGAGTGAAGAAGACATGGCCTTGGTGGAAAGCAACAATGAACTGCTTGAATTTGCCTCAATGAATCCAAGTATCATATAG 1539 0.4438 MTSSMGWWLLRQDAACMPPQEDGNDFFLAITASSTIHAFLVVRTVVKGEIFWDGLGRLAKGFEVLSHPNQYQDKMVKAMKVEFISKETIKPSSPTPQHLRTLKLSFIDQLAPVMHVRILFFFPIDGDLKDHRHPVDVADKSQKLKTSLSETLTHFYPLAGRVKDNAGIECNDAGVEFAEARVHGFLSDILKQPDANSGHQFVPNDVFPHATPGTLLQVQANFFDCGGLAIGVSISHKIADASTIGSFIKAWSAIALGCMTEALVPKYILGSLYPSVDFPVVLPAVEFRQLKCITKRYVFDSSKITKLKTKVASTMVQRPTRVEAVLALIWKCATTASRTTMGMTTRPSLLSQMVNIRKRVAPPLPESSVGNLLGHFTVQPEESEMELQSLVVKLRKGLEEFSKIYVQKLQEGNAFLTVCEGLKDLELVYKDGIDFYGCTSWCRFSFYDADFGWGKPKWVSVPSLSIKNSFVLMDTSDGKGIEAWVTLSEEDMALVESNNELLEFASMNPSII 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2870 512 Gene3D - 290 504 IPR023213 -
Glsi10g2870 512 Gene3D - 77 277 IPR023213 -
Glsi10g2870 512 Pfam Transferase family 79 501 - -
Glsi10g2870 512 PANTHER F21J9.9 82 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2870 Glsi-ChrGlsi10 54323833 54326564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2870 79 496 Monolignol Biosynthesis Gene Families AT5G48930 26.374 2.18e-27 112