Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2863 ATGCCTTCATCTGCTCTCCAATGGCTAAGCCTTGTGGGCATCATATGGCTCCAAGCCATAAATGGCACTAACACCGACTTCCCTGCTTACTCCTCCCAGCTGAAGGAGCTTCTTTCCATATCCCAGTTGCAGCTCAATAACCTGGCTTTTGCCTCTGATGCTGGGAAACTGTTTGGCTGGTTTTCTGGCATGGCTGCTATTTACCTCCCCCTTTGGCTTGTCCTCATGATTGGTTCAACTCTTGGGTTAATTGGTTATGGTGTGCAATATCTGTTCATAATAAATCAAATTTCCTCTCTTTCCTATTGGCATGTCTTCTTGCTAACTGTTCTGGCAGGGAATAGCATTTGTTGGATTAACACCGTCTGCTATGTTGTCACAATAAGGAACTTCCCATCTGATCGCCAAGTTGCTGTGGGGTTAACAAGTAGTTACCAAGGATTAAGTGCAAAGATTTACACCAATATTGTTGAAGCTGTTTCTCCACACAAAAAGGCTAGAAGTTTTCTCTTCTTAAACTCTGTCCTACCTGTTGTAGTTAGCCTAATAGCAGCTCCTGTAATTAGAGAAATTAAAGTCACTCGGTCTACACACATGGGTTTTGGAATTGTTGTAATGTTTGTTATTACAATTGGCACTGGAATATATTCTGTGATGAGTAGCTTGCAATTTGTGTCAAGCAAAGTATCTCCTCTGAGTAGCCTGATTGGTATTCTTGTGTTTCTTCTCTTTCCCTCATTAGTTCCAGTTTCACAGAAGATCAAGGAATTGGTGATATCATGGCTCAAAAACAGAGAAAGACTAAGAATTTATCATTTCACTGTGGAAGAGAACACTAATGAAGAGAGGACAGAGAATGAGGTAAAAGAGGGAGAAGATAGCAGAGAAGTTCACGATCTTCGTGTAAGAGAAGAAATTGGAGTACAATTGATGCTAAGAAGAGTAGATTTCTGGTTATATTTTTTTATCTATTTTTTTGGAGCCACTGTTGGTTTAGTATTTCTGAATAACTTAGGACAAATAGCTGAATCGAGGGGTTGCTCTGGTACTTCCTCTTTGGTGTCTTTGTCTTCATCTTTTGGTTTCTTTGGCCGTCTCATGCCATCTCTCATGGACTACTTCTACAGGGGTAAGTGTACGATTTCAAGACCAGCTTCTATGGTTGCATTGATGGCTCCAACAGCAGGAGCATTCTTTTTACTTCTCAATAAAACTGACCTTGCCCTCTACATAAGCACTTCAATAATTGGAGTGTGCACTGGGGCCATTACTTCCATTTCTGTGTCCACAACCACTGAGCTATTTGGCACAAAGAATTTCTCTGTAAACCATAATGTGGTAGTGGCCAACATTGCCGTGGGTTCTTTTTTGTTTGGCTTCTCAGCTGCCCTTCTTTACCGTAAAGAAGGAGATGGAAATGGGAAATGCATGGGCATAGAATGCTACAGAAACACTTTCATCATCTGGGGTTCCCTCTGTTCCTTTGGGACTTTCTTGGCTTTGATTCTACATGCTAGAACTCGCAAATTTTACTCAGAAAGGCAATAG 1548 0.4121 MPSSALQWLSLVGIIWLQAINGTNTDFPAYSSQLKELLSISQLQLNNLAFASDAGKLFGWFSGMAAIYLPLWLVLMIGSTLGLIGYGVQYLFIINQISSLSYWHVFLLTVLAGNSICWINTVCYVVTIRNFPSDRQVAVGLTSSYQGLSAKIYTNIVEAVSPHKKARSFLFLNSVLPVVVSLIAAPVIREIKVTRSTHMGFGIVVMFVITIGTGIYSVMSSLQFVSSKVSPLSSLIGILVFLLFPSLVPVSQKIKELVISWLKNRERLRIYHFTVEENTNEERTENEVKEGEDSREVHDLRVREEIGVQLMLRRVDFWLYFFIYFFGATVGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLMPSLMDYFYRGKCTISRPASMVALMAPTAGAFFLLLNKTDLALYISTSIIGVCTGAITSISVSTTTELFGTKNFSVNHNVVVANIAVGSFLFGFSAALLYRKEGDGNGKCMGIECYRNTFIIWGSLCSFGTFLALILHARTRKFYSERQ 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2863 515 Pfam Nodulin-like 7 250 IPR010658 -
Glsi10g2863 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 512 - -
Glsi10g2863 515 SUPERFAMILY MFS general substrate transporter 5 509 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2863 Glsi-ChrGlsi10 54027110 54029022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2863 1 514 Nodulin-like Gene Family AT2G30300 48.859 9.67e-155 449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0443 08 3714265 3717662 Glsi10g2863 10 54027110 54029022 CCT
Glsi10g2863 10 54027110 54029022 Glsi10g2863 10 54027110 54029022 ECH