Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2852 ATGGTTTGCCTCAGATTTGTCTATGACGAGATACCTGGTTTGAATTGTTGCAAAGAAACTAAGTTACCTTCTTCTTCTTCAAACCCCATTTCCATCTCCAAGCGTTATGAGCTTTCTAGCAAGCTAGCAGGGAGTGAGCTTATCCACATGGCTGAAAACGGCGAGGAGAAGTTATTGGCTATGGCGCGCCACATAGCAAGGACCTTGGGCCACGATAACAACATGGCGGATGATATTCTGCAAATCTTCTCCAATTTCGATGGAAGATTCTCACGTGAGAAGTTATCGGAGAGAGGCGGCGACGATGATCCCAGAGTTTACACTGCACTGGAAGATACCCTCAACTCTCTTGACCTTCGGATCTCCCAATACTCGTCGTCCGATCAGCCGATCTGGGCTGACTCGGCTGACTCAGCCGCCTTCCTTGATGCCATCGACGAATTAATCGCAACCCTCAGCGACTGGAGCTCGTTGGCGGTGGATAAGACTGTTGGTGCATGCTTAGTACGCGCGGAGGATATGCTTCAGCAGGCCATGTGTCGGGCCGAGGACGAGTTCAGGTCTCTGATGGAACGTGGTGGCGAGTCGTTTGACCTGACTCGGGGGGACAGGACAAGTGTGTCAACTCGCAATTTGCCTTCTGACTCGGAGGAGGACGATGAAGAAGACGCTGAAGTCGAAGGGCTTATAAGAAGCAAGGACGAGTACCAAATTCCGGTGGCGAAGCCGGTGGGCGACTACGATATCGTGATCGACGCTCTACCTTCTGGTACGATCAACGACCTTCACGAAATTGCGAAGCGTATGTTGGCTGCTGGGTTTGGGAAGGAGTGCTTGCACGTGTATAGCAGCTGCCGAAGAGAATTCTTGGAGGAGAGCTTGTCGCGGTTGGGGTTGCAGAAGCTGAGCATCGAAGATGTTCACAAGATGCCATGGCAGGACCTCGAAGACGAGATTGAAAGATGGACTAAAGCTTCCAACGTTTCTCTTCGGATACTATTTCCCAGTGAGCGGCGACTCTGCAATCGCGTCTTCTTCGGATTCTCCTCTGCTGCTGATCTCTCTTTCATGGAGGTTTGCCGGGGATCGACGGTTCAGCTACTGAATTTCGCCGACGCCGTTGCGATTGGAAGCCGATCACCAGAGCGTTTGTTCAGAATTCTGGACGTATTTGAGACATTAAGGGACCTTCTTCCCGAATTCGAGTTATTGTTTTCTGATCAGTACTGCGTGTTTCTCAGAAATGAAGCAATCACAATCTGGAAGAGATTAGGGGAAGCAATTAGAGGTATTTTCATGGAACTAGAGAATCTGATTCGTCGTGACCCAGCGAAGGCAGCTGTTCCCGGTGGTGGGCTTCACCCAATTACTCGCTATGTGATGAACTACCTACGTGCTGCTTGTCGTTCTCTGCAGACCCTTGAGCAGGTTTTTGAAGATAATGGGCTGCTATTGAAAGAGTACCCGAAGCTTGACGACAGAGTGGCATCCTCATCTTCACTATCTGTGGAAATGGCCTGGGTTATGGAATTGTTAGAGAGTAATTTGGAGACCAAGTCCAAAATCTATAAGGACTCTGCATTGTGCTCTGTTTTCATGATGAATAATGGGAGGTACATAGTTCAAAAGGCAAGAGATAGTGAACTTGGAACCCTTTTAGGCGACAATTGGATCCGAAAACACACTGCAAAAGTCCGGCAATACCATGCTAGCTATCAAAGAAGCTCATGGAACAAGGTGCTGGGCTTGTTGAAACTAGAAAGTGGATCATTGGCACATAATGTAGCCGCGAAGTCTATGAAAGACAAACTCAAATCGTTCAACATGCAGTTTGAGGAGATATGCAGGGTTCAATCTACATGGTTTATCTATGATGAGCAACTAAGGGAAGAGATAAGAATTTCCCTTGAAAGAATCTTGCTGCCTGCATATGGAAACTTCATTGGAAGGTTCGAGAATGTCCCTGAACTTGGCAAGCATGCTGATAAGTATATCAAGTATGGAGTGGAGGACATTGAAGATCGGCTGCAGGATTTGTTTCATGGAAACAGTGGATCAGCTGGTAGCCGAAAGTGA 2076 0.4803 MVCLRFVYDEIPGLNCCKETKLPSSSSNPISISKRYELSSKLAGSELIHMAENGEEKLLAMARHIARTLGHDNNMADDILQIFSNFDGRFSREKLSERGGDDDPRVYTALEDTLNSLDLRISQYSSSDQPIWADSADSAAFLDAIDELIATLSDWSSLAVDKTVGACLVRAEDMLQQAMCRAEDEFRSLMERGGESFDLTRGDRTSVSTRNLPSDSEEDDEEDAEVEGLIRSKDEYQIPVAKPVGDYDIVIDALPSGTINDLHEIAKRMLAAGFGKECLHVYSSCRREFLEESLSRLGLQKLSIEDVHKMPWQDLEDEIERWTKASNVSLRILFPSERRLCNRVFFGFSSAADLSFMEVCRGSTVQLLNFADAVAIGSRSPERLFRILDVFETLRDLLPEFELLFSDQYCVFLRNEAITIWKRLGEAIRGIFMELENLIRRDPAKAAVPGGGLHPITRYVMNYLRAACRSLQTLEQVFEDNGLLLKEYPKLDDRVASSSSLSVEMAWVMELLESNLETKSKIYKDSALCSVFMMNNGRYIVQKARDSELGTLLGDNWIRKHTAKVRQYHASYQRSSWNKVLGLLKLESGSLAHNVAAKSMKDKLKSFNMQFEEICRVQSTWFIYDEQLREEIRISLERILLPAYGNFIGRFENVPELGKHADKYIKYGVEDIEDRLQDLFHGNSGSAGSRK 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2852 691 FunFam Exocyst subunit Exo70 family protein 124 688 - -
Glsi10g2852 691 Pfam Exo70 exocyst complex subunit 320 678 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi10g2852 691 Gene3D Exocyst complex component Exo70 132 690 - -
Glsi10g2852 691 PANTHER EXOCYST COMPLEX PROTEIN EXO70 109 682 IPR004140 GO:0000145|GO:0006887
Glsi10g2852 691 MobiDBLite consensus disorder prediction 197 223 - -
Glsi10g2852 691 SUPERFAMILY Cullin repeat-like 132 681 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2852 Glsi-ChrGlsi10 53618039 53623770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2852 50 684 EXO70 exocyst subunit family AT5G58430 69.545 0.0 912