Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2830 ATGGAGTTCAAGGAGTTTACAATCAGAAGCTATGAAGGGCAATCTGATAGAGCTCAAGTGGAAGATCTTGAGAGAAGATGCGCAGTAGGGCCAGGAGAAAGCGTTTTTCTCTTCACAGACTGTTTGGGTGACCCCATCTGTAGGATTCGAAACAGTCCCATGTACAAGATGCTGGTAGCAGAGTTGGACAAGGAATTGGTTGGTGTCATTCAAGGCTCTATAAAGGTGGTCACAGTTCAAAGTCATCCTCCTAAGGATTTGGCAAAGGTGGGCTATGTCCTTGGCCTGAGAGTTGCTCCCCACCTTCGGAGAAAAGGGATTGGCTCCAGTCTAGTGCGAAGACTAGAAGAATGGTTCACTTCAAACGATGTGGATTATGCATATATGGCCACAGAGAATGACAACCATGCTTCGATTAATCTTTTCATGGACAAGTTTGGGTACACCAAGTTTAGGACTCCGGCTATACTTGTAAACCCAGTGAACCATCGTTCGTTCCGAATCTCATCCAATATTGAGATAGCCATGCTCAAGATTGAGCAAGCTGAGTCGCTCTATAGAAGATTCATGGGCTCCACTGAGTTCTTCCCTAATGATATCGACAATATACTAAGAAACAAGCTCAGCTTGGGGACTTGGGTAGCTCATTTCAAAGGAGATATCTGGGGTGATTTTGGGTGTGATGGAAAAGTTCCCAATAGTTGGGCCATGCTTAGTGTATGGAACAGTGGGGAAATCTTCAAGCTTAGGCTAGGAAAAGCACCTTTTCCTTGCTTGTTATACACAAAGAGTTGGAGCTTGATTGATAAAATTTTCCCATGCTTGAAACTGCCTTCCTTACCTGATTTCTTCAACCCATTTGGGCTCTACTTCATGTATGGGGTTTACCATGAAGGGCCATTCTCCGGGAAGCTAGTGAGGACCTTGTGCCAGTTTGTGCACAACATGGCTGCAAAGTCTAAGGATGAGAACTGCAAGATTATTGTGACAGAAGTTGGAGGACTAGATGACCTCAAGCATCATATCCCACATTGGAAATCGCTCTCGTTCCCGGAGGACTTGTGGTGCATAAAGGCCTTGAAAAATGAAGGGACAAAGACGTTTCATGAATTAACCAAAAGCCCACCAAGAAGATCTCTTTTTGTAGACCCCAGAGAGGTTTAA 1164 0.4459 MEFKEFTIRSYEGQSDRAQVEDLERRCAVGPGESVFLFTDCLGDPICRIRNSPMYKMLVAELDKELVGVIQGSIKVVTVQSHPPKDLAKVGYVLGLRVAPHLRRKGIGSSLVRRLEEWFTSNDVDYAYMATENDNHASINLFMDKFGYTKFRTPAILVNPVNHRSFRISSNIEIAMLKIEQAESLYRRFMGSTEFFPNDIDNILRNKLSLGTWVAHFKGDIWGDFGCDGKVPNSWAMLSVWNSGEIFKLRLGKAPFPCLLYTKSWSLIDKIFPCLKLPSLPDFFNPFGLYFMYGVYHEGPFSGKLVRTLCQFVHNMAAKSKDENCKIIVTEVGGLDDLKHHIPHWKSLSFPEDLWCIKALKNEGTKTFHELTKSPPRRSLFVDPREV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2830 387 CDD NAT_SF 57 128 - -
Glsi10g2830 387 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 387 - -
Glsi10g2830 387 Gene3D - 13 155 - -
Glsi10g2830 387 Pfam Acetyltransferase (GNAT) family 52 148 IPR000182 GO:0016747
Glsi10g2830 387 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 173 IPR000182 GO:0016747
Glsi10g2830 387 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 152 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2830 Glsi-ChrGlsi10 52616729 52618010 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Glsi10g2830 Acetyltransf_1 3.7e-16 CL0257