Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2826 ATGGAAGGCATGAGTCAGGGGGAGCCGTCATGGCCCAAGAAACCTTTTTCACTAATGGCTGCTTCTAAACTTCCTCTGGGTATAACCTTACCATTTCATGTATGGCAAAAACCCTACTTTTACAGCCTTGATGATGTTGTCGCCAGTAGCATCGTAGTCGCACCCAAGCCATATCTCCAGTTTACCAGTTCTAATACCTCTTCTGCACTAGAAGCAGACGCCGGCGCCAGTGGGAAGAGGGAAGAGTACTCCACACCTGATTTCGATGAGAAGAATAGCACCCATGGCAGCGGTGCACTTTCTGTTGGCGCTATTGGTGTTGGCTCTACGGCCAAAACTGACGAAGAACAAACCCAACAACCACAACCAGCTGATTCGGCACGTTGCTCAGATTTGGATCCTAAGAAGCTCAAGCGAATCATGTCAAATCGGCTTTCTGCCCAGAAATCCAGATTGAAGAAGATTAAACATTTGGCTGATTTGGAGAGGCAAGCAAAAAATTTTGAGACTCAGATAGCTATTCTTCAGCCTCAAGTTGCAGCCTATAAAACTCAGAAGCAGCTATTGATATGGGAGAAAACGACTTTAAGCCAAAAACTTGCTGCTCGTGAGAAAGAAAAATTTGTTAAAGAAGCTGAAATTGAAAAGAACCAAGCAGAAGTACGAATGCTGAGGGAACTTGAGAAGAAACAAGATGAAGAATTACAAGCACAAGCAATGATGGTGTTTAATGGGAATACTGGTCTGCAGCAATTGTCCGATTCGAAAAAGAAATTTGGCCTGGGACAAATGGTTTATACAAATTCTGCTCAAGAAGAAACATCAGCAATGGAACTCGATAATTCACAAAACCAAGGGCAGATGTGGATACTTGACCCGAATGACCAGAAACTGAATTTCAACACTGCCGAACTGAGTGAGTTGGACGCCATTGTTAATACCCCGATGCCAAACAACAAGGCGTTCAACCCAGACTTTTGCTATGGCTTTAAATATTGA 999 0.4364 MEGMSQGEPSWPKKPFSLMAASKLPLGITLPFHVWQKPYFYSLDDVVASSIVVAPKPYLQFTSSNTSSALEADAGASGKREEYSTPDFDEKNSTHGSGALSVGAIGVGSTAKTDEEQTQQPQPADSARCSDLDPKKLKRIMSNRLSAQKSRLKKIKHLADLERQAKNFETQIAILQPQVAAYKTQKQLLIWEKTTLSQKLAAREKEKFVKEAEIEKNQAEVRMLRELEKKQDEELQAQAMMVFNGNTGLQQLSDSKKKFGLGQMVYTNSAQEETSAMELDNSQNQGQMWILDPNDQKLNFNTAELSELDAIVNTPMPNNKAFNPDFCYGFKY 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2826 332 SMART brlzneu 131 195 IPR004827 GO:0003700|GO:0006355
Glsi10g2826 332 MobiDBLite consensus disorder prediction 69 133 - -
Glsi10g2826 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 138 153 IPR004827 GO:0003700|GO:0006355
Glsi10g2826 332 MobiDBLite consensus disorder prediction 111 126 - -
Glsi10g2826 332 Gene3D - 134 204 - -
Glsi10g2826 332 MobiDBLite consensus disorder prediction 75 89 - -
Glsi10g2826 332 Pfam Basic region leucine zipper 133 184 IPR004827 GO:0003700|GO:0006355
Glsi10g2826 332 CDD bZIP_plant_RF2 136 187 IPR044759 GO:0003700|GO:0006355
Glsi10g2826 332 PANTHER BASIC LEUCINE ZIPPER 34 87 259 - -
Glsi10g2826 332 Coils Coil 202 230 - -
Glsi10g2826 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 133 189 IPR004827 GO:0003700|GO:0006355
Glsi10g2826 332 SUPERFAMILY Leucine zipper domain 135 189 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2826 Glsi-ChrGlsi10 52329899 52331932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2826 124 212 bZIP Transcription Factor Family AT2G42380 37.079 8.09e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi10g2826 bZIP_2 3.5e-08 CL0018