Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2822 ATGTCCAGTTCTAACAGCAGTGGAACTCCTCGCACTACTTCATTATTCAAGACCTGTTTCCACGGAGTCAATGGGATTTCAGGAATTGGGATAGTGTCTATACCATATGCACTAGCATCAGGAGGTTGGCTAAGCTTGATACTTCTCTTCATCATCGCCATCGCAGCCTATTATACTGGCATATTGATAAAAAGATGCATGGATAAGGATTCCACTATCGAATCCCTTCCTGACATTGGCGAACGTGCATTTGGCGAAAAGGGACGGTTAATGGTAAATATTGCCATGAATTGTGAGCTTTACTTGGTTGTTACAGGGTACCTTATTCTTGAAGGAGACAACCTAAACAAATTGATATCTCATGTTCACGTGGACATAGGGGGTCTACGAATTGGTGGAGCACAATGCTTTGTCTTAGTTACTGCTCTTATTATTATGCCTACTGTTTGGTTGCAAGACCTAAGCCTTCTTTCTTATGTGTCTGCCACTGGAGCTTTAGCTTCTACTATCTTTCTTTTTGCGCTGTTGTGGAATGGTGCAATTGATGGAACTGGGTTTCATGGCAAAGGGATTCTTTTTAACTGGAAAGGAATCCCTGCTGCTGTTAGCTTATATGCCTTCTGCTATAGTTCCCATCCAGTCTTCCCCACTCTATATAATTCTATGAAGAACAAACATCAGTTCTCCAATGTCCTGCTATTTTGCTTTACATTATGCACCTTAGTATACGCAGCGATAGCAATTTTGGGTTACTTGATGTTTGGATCAGAGGTTCAATCGGAAATAACTTTAAATCTTTCAAAAGGGAAAATAAGCTCAAAAGTGGCAATTTACACAACCTTGGTGAATCCTATAACCAAATATGCATTGATGCTTACACCAATTGTCGATGCCATGAAAATTGCAGTTCCATCTCGCTACAGCAAAAGGGTCTCCCATTTACTGCTCAGTACCTCCATACTAACCAGCACTGTAATCGTAGCCCTAGCTGTTCCTTTTTTTGGATATTTGATGTCGCTGGTTGGAGCATTATTAAGTGTCTCAGCTTCATTTCTAGTGCCATGCGTGTGCTACTTGAAGATTTCTAGCTCTTATCGGATATTTGGATGGGATATGATCATCAATTGTTCAATAATCTTTATGGGCCTTTCAATTGCAGCAGTGGGAACTTACACGTCCCTACAAGAAATAATCAAACATTTTAAAATGTAA 1212 0.4026 MSSSNSSGTPRTTSLFKTCFHGVNGISGIGIVSIPYALASGGWLSLILLFIIAIAAYYTGILIKRCMDKDSTIESLPDIGERAFGEKGRLMVNIAMNCELYLVVTGYLILEGDNLNKLISHVHVDIGGLRIGGAQCFVLVTALIIMPTVWLQDLSLLSYVSATGALASTIFLFALLWNGAIDGTGFHGKGILFNWKGIPAAVSLYAFCYSSHPVFPTLYNSMKNKHQFSNVLLFCFTLCTLVYAAIAILGYLMFGSEVQSEITLNLSKGKISSKVAIYTTLVNPITKYALMLTPIVDAMKIAVPSRYSKRVSHLLLSTSILTSTVIVALAVPFFGYLMSLVGALLSVSASFLVPCVCYLKISSSYRIFGWDMIINCSIIFMGLSIAAVGTYTSLQEIIKHFKM 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2822 403 PANTHER OS05G0424000 PROTEIN-RELATED 20 389 - -
Glsi10g2822 403 Pfam Transmembrane amino acid transporter protein 11 393 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2822 Glsi-ChrGlsi10 52189939 52191421 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2822 12 398 Amino Acid or Auxin Permease AAAP Family AT3G28960 56.959 6.99e-159 451