Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2820 ATGCGGAATTTCACCCAGCTTTATCCTGGTAGTCAGCTACCAGAAAAGCTCATGTTGAATATTTGCAAGCACTACAATTTATTGCCTCTCAGCTATGCTCTGGCGGGATTCAATATAAAAGATGTATTTCTTCACATCAAGTTGATAGAGCAAGCATCGGTGGATGATCAGCCTACAATTTTAATTCAAGAAGAGTCGGATAATGAAATTCAGGGGTCCATATTTAAGTTGACATTTGCTTGTAACTCTCCAATTTCATGGCCAGCCATGTCCAGTAAACTCGATAGTTCATGTATTTTCTGCAAGAAGATACATATCTTTGAGAAGAAAGGTTTTACTCTTGGGATTGTTCTTCTTCTTGTTCAGCCTGGACAAGACAAATTGGTCAGAATCCGAGTTGAAAATGCTCTAAAATTTTCCATGAAGAAGCCTAAAACTAGTGCAGTGAAGCTTCCCTTTGGGCTTTGTGGATGTCAAGAAGAAAACTCCAAGGGGAGAGAAATTGGAGAGAATGAAGAAGATAGTGGCGATGCACACTATAGAGACAGTTTTGGGAATTCTAGCCCAAAGGTTGAGCTTCAGGTGCCCCTACCTACTTTATCTTTCCTTGTATCGGTAGATGAATGGTGGACAATTCAATTAGGTGGGGATGAGACAAAAAAATGGCTATTGAACTCAGATAATCTCGAGTTCTATGGTGTTTCAGTATATGAGAATCATGGGTTATGCATGATGACGAAGTTCATGGAAGGTGGGTCAGTTCATGACTTAATGCTTAGGAACAAGAATCTCTGGACAAAGGAAATCATACGAATTGATGTTGACGTAGCTGAAGGGATCAAGTTTATGAATGATCACTGTGTTGCCTATAGAAACCTCAGTATACACAAAATTCTATTGGATCGCCATGGGAATGCTTGCTTAGGAGATATGGGTATAGTCACTACATGCAAGGATGCTGGAGAAGTAATGGAATATGAAACTAATGGCTATCGATGGCTGGCTCCAGAGGTTTGA 1017 0.4012 MRNFTQLYPGSQLPEKLMLNICKHYNLLPLSYALAGFNIKDVFLHIKLIEQASVDDQPTILIQEESDNEIQGSIFKLTFACNSPISWPAMSSKLDSSCIFCKKIHIFEKKGFTLGIVLLLVQPGQDKLVRIRVENALKFSMKKPKTSAVKLPFGLCGCQEENSKGREIGENEEDSGDAHYRDSFGNSSPKVELQVPLPTLSFLVSVDEWWTIQLGGDETKKWLLNSDNLEFYGVSVYENHGLCMMTKFMEGGSVHDLMLRNKNLWTKEIIRIDVDVAEGIKFMNDHCVAYRNLSIHKILLDRHGNACLGDMGIVTTCKDAGEVMEYETNGYRWLAPEV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2820 338 Gene3D Transferase(Phosphotransferase) domain 1 223 338 - -
Glsi10g2820 338 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 230 338 - -
Glsi10g2820 338 Pfam Protein tyrosine and serine/threonine kinase 229 338 IPR001245 GO:0004672|GO:0006468
Glsi10g2820 338 SUPERFAMILY Protein kinase-like (PK-like) 230 338 IPR011009 -
Glsi10g2820 338 ProSiteProfiles Protein kinase domain profile. 117 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2820 Glsi-ChrGlsi10 52011705 52013256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2820 242 338 MAP Kinase Kinase Kinase AT2G17700 33.673 2.75e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Glsi10g2820 PK_Tyr_Ser-Thr 3.2e-13 CL0016