Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2817 ATGTCGAAGGTGGTGTGCGTCACCGGCGGCAGCGGCTGCATTGGATCATGGCTCGTCCGTCTCCTTCTCGATCGCGGCTACACCGTTCACGCCACTGTTAAAGATCTCAAGGATGATAATGAAACCAAACATCTAGAAGCTCTTGAAGGGGCTGACACTCGCCTCCGTCTCTTCCAGATCGATCTCCTCGACTACAACTCCATCATTGCCGCCGTCAACGGCTGCGCCGGCGTTTTCCATCTCGCCTCTCCCTGCATCGTCGATCAAGTCCATGATCCTCAGAAGGAACTTCTGGACCCAGCGATTAAAGGGACAATCAATGTGCTGACTGCGGCGAACGAAGCTGGGGTGAATCGCGTTGTGGTCACTTCATCGATCTCGGCTATAACTCCGAGCCCCAATTGGCCATCAGATGTTATTAAGGGGGAGGATTGCTGGACGGACCTTGAATACTGCCAGCAAAAGTCGTTATGGTATCCGATGTCAAAAACATTAGCTGAGAAAGCTGCTTGGGATTTCGCCAAGGAGAAAGGTTTGGATATTGTGGTGGTAAATCCTGGCACTGTGATGGGCCCTGTTATTTCTCCAAGACTTAATGCAAGCATGGTAATGCTTGTTCGTCTTCTTCAAGGCTGCACTGAAACATATAAGGACTTTTTTATGGGATCAGTCCACTTTAAAGATGTAGCCTTAGCACATATTTTGGTGTATGAAAACAAAGAAGCAGCTGGTAGGCATTTGTGCGTTGAAGCTATCTCTCACTACAGTGACTTCGTGGCAAAGGTTGCTGAACTTTATCCTGGATATAATATGCTTAGGTTGCCTCGAGATACCCAACCAGGATTGTTGAGAGCAAAAGATGCATCCAAGAAACTGATCGATATGGGTATGCAATTCATTCCCATGGAGCAAATTATTAAGGATGCTGTAGAGAGCTTGAAGAGCAAGGGGTTCGTTTGA 960 0.4781 MSKVVCVTGGSGCIGSWLVRLLLDRGYTVHATVKDLKDDNETKHLEALEGADTRLRLFQIDLLDYNSIIAAVNGCAGVFHLASPCIVDQVHDPQKELLDPAIKGTINVLTAANEAGVNRVVVTSSISAITPSPNWPSDVIKGEDCWTDLEYCQQKSLWYPMSKTLAEKAAWDFAKEKGLDIVVVNPGTVMGPVISPRLNASMVMLVRLLQGCTETYKDFFMGSVHFKDVALAHILVYENKEAAGRHLCVEAISHYSDFVAKVAELYPGYNMLRLPRDTQPGLLRAKDASKKLIDMGMQFIPMEQIIKDAVESLKSKGFV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2817 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Glsi10g2817 319 Gene3D - 1 319 - -
Glsi10g2817 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 310 - -
Glsi10g2817 319 FunFam Cinnamoyl-CoA reductase 1 1 319 - -
Glsi10g2817 319 Pfam NAD dependent epimerase/dehydratase family 5 242 IPR001509 -
Glsi10g2817 319 CDD FR_SDR_e 5 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2817 Glsi-ChrGlsi10 51824295 51830195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2817 3 319 Monolignol Biosynthesis Gene Families AT5G58490 77.603 0.0 529