Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2813 ATGGGGGGTTCCTCACCTTGTGCCTCCTGCAAGTTGTTAAGACGCCGTTGCACGAAGGATTGCATTTTTGCTCCATACTTTCCTTCAGATGATCCTCATAAGTTTGCCATTGTGCATAAAGTCTTTGGTGCTAGCAATGTCAGCAAAATGTTGCATGATCTTCCAGTGCATCAAAGAGCTGATGCTGTGAGCAGTTTGGTTTACGAGGCAAATGCTAGAGTGAGAGACCCTGTTTACGGATGTGTTGGAGCAATATCATACCTGCAAAGCCAAGTCTCACAATTACAAATGCAGCTTGCAGTGGCTCAAGCAGAGATTCTTTGCGTCCAGATGCAGCAAGAGCCTACGAACTTGCCAACCCAGATAGATCACCAATATGACAAATCGTTTCTCCTATCTGATAATAACTACGAAGGCATTCCTCAGTACCTGAACTTTTCTTCTTCTCCTTCCTCATCTAGCAATGTACTCCAAGACCCTCTTAAGAGAGAGTCTTTTTGGACTTAA 507 0.4418 MGGSSPCASCKLLRRRCTKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLHDLPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQSQVSQLQMQLAVAQAEILCVQMQQEPTNLPTQIDHQYDKSFLLSDNNYEGIPQYLNFSSSPSSSSNVLQDPLKRESFWT 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2813 168 Coils Coil 85 105 - -
Glsi10g2813 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 123 - -
Glsi10g2813 168 MobiDBLite consensus disorder prediction 148 168 - -
Glsi10g2813 168 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Glsi10g2813 168 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2813 Glsi-ChrGlsi10 51633170 51633781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2813 3 168 AS2 family AT2G30130 66.146 7.50e-77 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi10g2813 LOB 1.1e-42 No_clan