Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2812 ATGGTGTTTGAAGAGGTAAGGAAATTCGAGGTAGAGAACTTACTTCAAGCTTCCGCGGAAATGCTGGAAAAAGGTAGGTGTGGTACAACTTACAAGGCAATTCTGGATGATAGAAGTGTCGTTGCAGTGAAGAGGCTCAAGGATGCTCAGATTGGAGGGAATAAGGAGTTCGAGCAGAACATGGAAGTTCTGGGAAGGCTGAGGCATCCAAACATTGTTAAGGTGAGAGATTACTATTTTGCAAAAGATGAGAAGTTGCTGGTCTCTGATTTCATGCCCAATGGGAACCTGTTTTGTCCCATTCATGATGTGTCAAATAACATATCAGGAAGAACAAGCTTGATCGGGGCAAATCGCCAATCCAAAAAAAAAAATAGGGACAAATCTTCTCTAGTTTCTTCTGAGGAAGATGATGAATGGAAAACAGTGGAACCAAAGAACAAATCTGCTGCAACAAGGATTCAAAGCTTTGTTCCTTCCCAATTGAGCAATATTTTTGGAGGAGAATTGAGAAGTTTGGTGAGGGCTAAAGGTAGGAAATAA 543 0.4125 MVFEEVRKFEVENLLQASAEMLEKGRCGTTYKAILDDRSVVAVKRLKDAQIGGNKEFEQNMEVLGRLRHPNIVKVRDYYFAKDEKLLVSDFMPNGNLFCPIHDVSNNISGRTSLIGANRQSKKKNRDKSSLVSSEEDDEWKTVEPKNKSAATRIQSFVPSQLSNIFGGELRSLVRAKGRK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2812 180 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Glsi10g2812 180 SUPERFAMILY Protein kinase-like (PK-like) 20 106 IPR011009 -
Glsi10g2812 180 Pfam Protein kinase domain 22 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2812 180 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 113 IPR046959 -
Glsi10g2812 180 MobiDBLite consensus disorder prediction 120 146 - -
Glsi10g2812 180 ProSiteProfiles Protein kinase domain profile. 16 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2812 180 MobiDBLite consensus disorder prediction 117 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2812 Glsi-ChrGlsi10 51575702 51577360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2812 1 119 Receptor kinase-like Gene Family AT1G68400 60.000 1.53e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi10g2812 Pkinase 1e-10 CL0016