Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2810 ATGGCCACGGACGCGACGGCCAAATTCAAAAACCCTGACTTTCGGCCTGTTCCGCAGCCGCCCGATTTCCATCCAGAGATCACTGTGTCAGCCCATGATGGCCTCCAATTTTGGCAGTTTATGATTGCCGGTTCCATCGCCGGCTGCATTGAGCATATGGCAATGTTCCCCGTCGACACCGTAAAGACCCATATGCAAGCTCTTGGGTCATGCCCGATTAAGTCAGTTAGCGTTCGACAAGCCTTTCAATCAATTTTGAAATCTGAGGGTCCATCTGCGCTGTACCGCGGTATCGGTGCTATGGGTCTCGGTGCTGGACCGGCACATGCTGTTTATTTTTCCGTTTATGAGGCGTGTAAGAAATATTTCTCTGGTGGGAATCCCAATAACTCCGCTGCTCATGCGGTTTCGGGTGTATTTGCTACTGTTGCGAGCGATGCTGTGTTTACGCCCATGGATATGGTCAAGCAGAGATTGCAATTAAGTAATAGTGGTTACAAGGGTGTTTGGGACTGTATAAAGAGGGTTTTCAGGGAGGAGGGATTCGGAGCATTTTATGCATCATATAGGACTACAATTTTGATGAATGCACCATTTACAGCAGTACATTTTGCTACATATGAGGCTGCAAAAAGAGGTTTAATGGAGATTTCACCGGATAGTACTGACGATGAGCGTTTGATTGTTCATGCAACAGCTGGAGCTGCTGCTGGAGCTTTGGCTGCTGTGGTTACGACACCACTTGATGTGGTTAAAACCCAATTGCAGTGTCAGGGCGTTTGTGGATGTGCTAGATTTAAGAGTGGTTCAATAGGGGATGTTATTAAAACAATAGTGAAAAAAGATGGATACAGAGGGCTCATGCGAGGATGGATTCCAAGGATGCTCTTCCATGCTCCCGCGGCTGCAATCTGCTGGTCTACATATGAATCTGGAAAGACCTTTTTCCAAGATTTGAATCTGAGTAATGGCGGGGACACATAA 984 0.4705 MATDATAKFKNPDFRPVPQPPDFHPEITVSAHDGLQFWQFMIAGSIAGCIEHMAMFPVDTVKTHMQALGSCPIKSVSVRQAFQSILKSEGPSALYRGIGAMGLGAGPAHAVYFSVYEACKKYFSGGNPNNSAAHAVSGVFATVASDAVFTPMDMVKQRLQLSNSGYKGVWDCIKRVFREEGFGAFYASYRTTILMNAPFTAVHFATYEAAKRGLMEISPDSTDDERLIVHATAGAAAGALAAVVTTPLDVVKTQLQCQGVCGCARFKSGSIGDVIKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYESGKTFFQDLNLSNGGDT 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2810 327 Gene3D Mitochondrial carrier domain 21 163 IPR023395 -
Glsi10g2810 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Glsi10g2810 327 Pfam Mitochondrial carrier protein 35 125 IPR018108 -
Glsi10g2810 327 Pfam Mitochondrial carrier protein 226 318 IPR018108 -
Glsi10g2810 327 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Glsi10g2810 327 Gene3D Mitochondrial carrier domain 164 326 IPR023395 -
Glsi10g2810 327 PANTHER MITOFERRIN-1-RELATED 32 317 - -
Glsi10g2810 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 315 IPR018108 -
Glsi10g2810 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 122 IPR018108 -
Glsi10g2810 327 FunFam Mitochondrial substrate carrier family protein 22 217 - -
Glsi10g2810 327 SUPERFAMILY Mitochondrial carrier 33 310 IPR023395 -
Glsi10g2810 327 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Glsi10g2810 327 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Glsi10g2810 327 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Glsi10g2810 327 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Glsi10g2810 327 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2810 Glsi-ChrGlsi10 51490383 51501088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2810 233 323 Chloroplast and Mitochondria Gene Families AT2G30160 34.066 4.62e-06 45.8