Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2735 ATGAAGTCCAAGAAGCAAAGACTTGCGGGAAACAAGCCTTCTGTAACCAACCACAATGATCCTAATAGGCCCCTGAACTTCAGCACTCCTACAAATTCCTCAACCGTAGTCTCCGATACTTCTCCCGCAACTGCCTCTAAAGATCTTCTCAATAATGAAGACCAAAATCTTGACTACTTCAATTCTTTTCCACCTGGATATAGGTTTCACCCTACGGAGGAAGAGCTGATCACTTTCTATTTAAGCAAGAAAGTCAAGAATGAACCGTTACCGCGTAATCAAATGGTGGAATTGGATGACTGCGTTTTATGTAAGGTTTATAAGAAAGCTGAGAACTCTAACAACAAAACACCGCGTAAAATAAAGAAAAGGGGGATGAAATCTTCTGAACAACCGACTAATGATACTAGCAGTGATCTAAGTGGTGAATATGGAAGAGAGTTTGTAAACCAACCATCCCCAGAAATACCTCAGGATCAGTCTAACAATGAAGTTGCCGCTATTCCCGCATTCAACCAAACTGCTTTAGCCTCCGATTTGTTGGAATCGTTTCACTACGAGCCTCCTTCCTTGGAGGGTATAACTCCAGGGTTCACAGAGCCAGAGATGCCTCAGACTCGCTCTCAATATAACACACCTCAGTTGATGGTGGAGCCATTTCACTATAGGCCTGATTCTGTGGAGGACATAACTTCAAGTTTCACCTTCCAAGAAATGTCTCAGCCTCAATACAACAATGTGAATAGCGACGATACTACTATGGCCTCTAACTTTATGATGGAGCCAATTCTCTGCAACCCTCCATCACCACGGTTCACATGGGATCAACATTGCATTCAAGAGGATATGGGCTGGAGTAGTGTGACAGATTTTGACAACTTTGATTTACTCCCACAGTTGGATCCCATATTCGGTAACAATTTTGATGGGCAACTGATTCCATGGGAAAATATTTTACCAAGTAAACCTCCAAATACTCCATTTTAG 987 0.4235 MKSKKQRLAGNKPSVTNHNDPNRPLNFSTPTNSSTVVSDTSPATASKDLLNNEDQNLDYFNSFPPGYRFHPTEEELITFYLSKKVKNEPLPRNQMVELDDCVLCKVYKKAENSNNKTPRKIKKRGMKSSEQPTNDTSSDLSGEYGREFVNQPSPEIPQDQSNNEVAAIPAFNQTALASDLLESFHYEPPSLEGITPGFTEPEMPQTRSQYNTPQLMVEPFHYRPDSVEDITSSFTFQEMSQPQYNNVNSDDTTMASNFMMEPILCNPPSPRFTWDQHCIQEDMGWSSVTDFDNFDLLPQLDPIFGNNFDGQLIPWENILPSKPPNTPF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2735 328 MobiDBLite consensus disorder prediction 114 144 - -
Glsi10g2735 328 MobiDBLite consensus disorder prediction 130 144 - -
Glsi10g2735 328 MobiDBLite consensus disorder prediction 9 44 - -
Glsi10g2735 328 MobiDBLite consensus disorder prediction 114 129 - -
Glsi10g2735 328 MobiDBLite consensus disorder prediction 1 44 - -
Glsi10g2735 328 Pfam No apical meristem (NAM) protein 64 100 IPR003441 GO:0003677|GO:0006355
Glsi10g2735 328 SUPERFAMILY NAC domain 61 101 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2735 Glsi-ChrGlsi10 48859666 48861143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2735 63 99 NAC Transcription Factor Family AT1G77450 54.054 3.92e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi10g2735 NAM 1.9e-08 No_clan