Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2717 ATGGAGATTAAAGTCAATGGTGGAACTGTTACCCAGAAGGTAGACTTTGTTTACAACTTTTTTAAGAAGCAAGTTCTTGTTGATGTTGGGTTCCAGAAGGATGAGATGATTGACATCATTGGTGTGACAAAGGGTAAAGGTTATGAAGGCTCAGGCAATGAATTTCTGGTTAACTTGCATCAAGAGATTGAGAAAGACATAACCTTAATGGGTGGCTTCCCTCACTATGGTATTGTAAAGGATGACTTTCTCATGATCATGGGGTGCTGTGTTGGTCTTAAGAAAAAGGTTGTTACATTGCGTCAATCCTTGCTTAAGAAAACTTCTCTTGTTGCTCTTGAGGATATCAAACTCAAGTTTATTGACACCTCCTCAAAGTTCAAGCATGGTCATTTCTAG 399 0.3885 MEIKVNGGTVTQKVDFVYNFFKKQVLVDVGFQKDEMIDIIGVTKGKGYEGSGNEFLVNLHQEIEKDITLMGGFPHYGIVKDDFLMIMGCCVGLKKKVVTLRQSLLKKTSLVALEDIKLKFIDTSSKFKHGHF 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2717 132 SUPERFAMILY Translation proteins 1 127 IPR009000 -
Glsi10g2717 132 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 61 132 IPR045077 GO:0003735|GO:0005840|GO:0006412
Glsi10g2717 132 Pfam Ribosomal protein L3 62 127 IPR000597 GO:0003735|GO:0005840|GO:0006412
Glsi10g2717 132 Pfam Ribosomal protein L3 1 51 IPR000597 GO:0003735|GO:0005840|GO:0006412
Glsi10g2717 132 Gene3D Translation factors 9 132 - -
Glsi10g2717 132 FunFam Ribosomal protein L3 45 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2717 Glsi-ChrGlsi10 47821238 47821980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2717 1 132 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 41.451 1.24e-36 127