Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2714 ATGGACATAGAGGAAGACACCGCTGCCTATGGTAATGGGGGTGAACCAGACTATAAAGTGACATTTTCAAGAGGCAGAGATGAGAGGGGATTGTATCTGGTGTGGGAAGATTTGGCTGTTGTGGTTCCAAATTTTGGCAATGGACACACTAAGAGATTGCTTAATGGGTTGAGTGGATATGCTGAGCCGAACAGAATCATGGCAATCATGGGACCTTCTGGGTCTGGAAAATCCACTCTTCTTGATGCTTTGGCAGGTAGACTTCTTGGAAATGTTGTCATGACAGGCAATGTGCTTTTGAATGGAAAGAAGAAGAGATTAGACTATGGGGTTGTTGCTTATGTGACCCAAGAAGACATATTGTTGGGAACACTAACAGTCAGAGAAACAATATCTTACTCAGCGAATTTAAGGCTTCCAGCTACCATGACCAAAGAAGAAGTAAACGCCCTTGTAGAGGGAACAATTATGGAAATGGGTCTTCAAGATTGTGCTGATAGACTAATTGGGAATTGGCACTTAAGAGGTATAAGTGGTGGAGAAAGGAAAAGGCTAAGCATAGCACTTGAAATCCTCACAAGACCTGGCCTCTTGTTCCTTGATGAACCTACCAGCGGGCTGGATAGTGCCTCAGCATTTTTTGTTGTTCAAACTCTCAGAAATATAGCTCATGATGGAAGAACTGTTATAGCTTCCATACATCAACCAAGTAGTGAGGTTTTTGCACTTTTTGATGATCTTTTTCTCATTTCGGGGGGTCAAACAGTTTATTTCGGTGTAGCCAAAATGTCAGTTGAGTTCTTTGCCAAAGCAGGATTTCCATGTCCAACCAGAGGAAATCCTTCCGATCACTTCCTCCGATGTATAAATTCAGACTTTGACACTGTCACAAAGACTATGATGGCATCTCAGAAAATACCTGAACAAGACTCGTTCGCACGCTCGTTAACCAATTTATCAACTGCAGAAATCAAAGCGGTACTTGTTGAGAAATACCAATGTTCAGAGCATGCAACCACAGCAAGAGCAAGAATTCAAGAATTCTCAAACATTGGACGACAAGAGATTGAAAGTAAAAGCAAGAACCAAGCCAAATGGTGGAAGCAGCTGGCAACATTGACTCACAGATCTTTCGTGAACATGTCTAGAGATGTTGGTTACTATTGGATAAGGATAATAATTTACGTAGCCTTATCTTTGTGTGTTGGAACTATCTTTTTTAATGTTGGATCAAGTTATAGATCTATTTTTGCGAGAGGGTCTTGTGGCGCATTTATATCAGGTTTCATGACATTCATGGCCATTGGAGGCTTCCCATCCTTCATAGAAGAAATGAAGGTCTTTAAAAGAGAAAGGCTCAATGGGTACTATGGCATTGCCGTCTATGTTCTATCAAATTTTCTCTCTTCCTTTCCCTTCGTGGCAGCGATGTCCTTTGCTACAGGGACTATAACCTACCATATGGTGAAATTTCGACCTGAGTTTTCGCATTTTTTGTATATATGCCTTGATCTTCTGGGCTGCATTGCCGTTGTGGAGAGCTCAATGATGATTATAGCTTCACTAGTTCCCAACTACCTAATGGGGTTGATAATTGGAGCAGGATATATTGGTGTTATGATGATGACTTCCGGCTACTTCCGTCTGCTCCCTGATCTTCCCAGATTCTTCTGGCGTTATCCAATTTCATACATCAATTTTGGAGCATGGGGATTGCAGGGAGCTTACAAGAATGACCTGATAGGGCTGGAGTTTGATCCTTTGGTTCCTGGTGGACCAAAACTGAAAGGAGAAATCATCCTCACAACGATGCTTGGTATGCAAGTTGATCATTCAAAATGGTGGGACTTGGCTGCAGTCACAGTCATCCTCTTACTGCTTAGAGTACTTCTCTTTTTAATTCTCAAATTTAAGGAGAGAGCTTCCCCTCTCTTTCGTAAAATCTACACCAAGCAAACTCTGCAACGTATCAGCAAGCGGCCTTCGTTCAGGAAAGTACCAACTTTCCCTTCCAAGAGGCACCAATCACTGCATCCTTTGTCTTCTCAAGAAGGTTTCAACTCCCCAATTCATTAG 2076 0.421 MDIEEDTAAYGNGGEPDYKVTFSRGRDERGLYLVWEDLAVVVPNFGNGHTKRLLNGLSGYAEPNRIMAIMGPSGSGKSTLLDALAGRLLGNVVMTGNVLLNGKKKRLDYGVVAYVTQEDILLGTLTVRETISYSANLRLPATMTKEEVNALVEGTIMEMGLQDCADRLIGNWHLRGISGGERKRLSIALEILTRPGLLFLDEPTSGLDSASAFFVVQTLRNIAHDGRTVIASIHQPSSEVFALFDDLFLISGGQTVYFGVAKMSVEFFAKAGFPCPTRGNPSDHFLRCINSDFDTVTKTMMASQKIPEQDSFARSLTNLSTAEIKAVLVEKYQCSEHATTARARIQEFSNIGRQEIESKSKNQAKWWKQLATLTHRSFVNMSRDVGYYWIRIIIYVALSLCVGTIFFNVGSSYRSIFARGSCGAFISGFMTFMAIGGFPSFIEEMKVFKRERLNGYYGIAVYVLSNFLSSFPFVAAMSFATGTITYHMVKFRPEFSHFLYICLDLLGCIAVVESSMMIIASLVPNYLMGLIIGAGYIGVMMMTSGYFRLLPDLPRFFWRYPISYINFGAWGLQGAYKNDLIGLEFDPLVPGGPKLKGEIILTTMLGMQVDHSKWWDLAAVTVILLLLRVLLFLILKFKERASPLFRKIYTKQTLQRISKRPSFRKVPTFPSKRHQSLHPLSSQEGFNSPIH 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2714 691 MobiDBLite consensus disorder prediction 674 691 - -
Glsi10g2714 691 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 277 IPR003439 GO:0005524
Glsi10g2714 691 FunFam ABC transporter G family member 11 27 271 - -
Glsi10g2714 691 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524|GO:0016887
Glsi10g2714 691 Pfam ABC transporter 54 205 IPR003439 GO:0005524
Glsi10g2714 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 260 IPR027417 -
Glsi10g2714 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 27 660 - -
Glsi10g2714 691 MobiDBLite consensus disorder prediction 664 691 - -
Glsi10g2714 691 Gene3D - 27 271 IPR027417 -
Glsi10g2714 691 Pfam ABC-2 type transporter 369 578 IPR013525 GO:0016020|GO:0140359
Glsi10g2714 691 CDD ABCG_EPDR 30 259 - -
Glsi10g2714 691 SMART AAA_5 63 262 IPR003593 GO:0016887
Glsi10g2714 691 Pfam ABC-2 type transporter 234 331 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2714 Glsi-ChrGlsi10 47645116 47653396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2714 52 263 Calmodulin-binding Proteins AT2G36910 30.172 6.91e-12 67.4