Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2713 ATGACTGCTCCTTTGGTTAATCTTGGAAGATCGATTGAATATTTTACAAATCCAAACTGGGTTCGTTTTGTTGTTTGGTATTTGTTGTCAATCACTCCGCTGCAGGCTACTATGGAGATAGAAGCGGCCGGTGCTAGCAACAAAGGCCGCAGAAATGCTGCCAGCAGCATGGGTGCTTCTGAGGCTGCGGAACCATACGGTGGACTTGACAGAGGAAGCTGCTTGGTGTGGGAAGATCTAACTTCGATGCTACCAAACTTTGGGAAGGGACCAACCAAGAGGTTGCTTAATGGGCTTAACGGCTATGCTGAACCTGGTAGAATCATGGCTATTATGGGTCCTTCTGGCTCTGGGAAATCTACGTTGCTTGATTCACTAGCAGGTAGACTCTCAAAAAATGTGGTCATGACTGGAAATATTTTTCTCAATGGCAAGAAGAAAAGACTCGATTATGGTGAAGTTGCTTATGTAACTCAAGAGGATGTGTTGCTGGGAACTCTCACTGTCAGGGAAACAATATCATATTCAGCACATCTACGTCTTCCAACCTCAATGACCAAAGAAGAAGTTAGTGGCATCATTGAGGGAACAATCATAGAAATGGGTCTCCAAGATTGTGCAGATAGGTTGATTGGTAACTGGCACTTAAGAGGTATTAGTGGAGGGGAGAAGAAGAGACTTAGTATTGCACTTGAAATCCTTACAAGGCCTCGCTTATTGTTTCTTGATGAACCCACCAGTGGCCTTGATAGTGCCTCAGCTTTCTTTGTTGTTCAAACTCTTAGAAATGTTGCCCGTGATGGACGGACTGTCATCTCTTCAATTCACCAGCCAAGTAGTGAAGTATTTGCTCTCTTTGATGACCTTTTCTTACTATCTGGTGGTGAAACAGTGTATTTCGGAGAAGCAAAGATGGCAGTAGAGTTCTTTGCTGAAGCAGGATTTCCATGTCCACGCAAAAGAAATCCTTCAGATCACTTCTTACGTTGTATCAATTCTGACTTCGACATTGTGACAGCCACTTTGAAGGGATCTCAAAGAATTCATGATGTTCCAAATTCATCAGATCCTTTCATGAACTTGGCTACTGCAGAGATTAAAGCAATGCTAATTGAGAAATATAGGCGTTCAGGGTATGCTAGAAGGACCAAAGATAGGATTCGAGAACTATCCAACATTGAAGTACTAGAAACTGAAACACAGAGTGGTAGTCAAGCTAGTTGGTGGAAGCAACTTCTGACATTGACAAGAAGATCATTTCTCAACATGTGTAGAGATGTGGGTTACTACTGGTTAAGGATTATAATCTACATCATAGTATCTATATGTGTTGGAACTATTTATTTTGATATTGGGTATAGCTACACTTCGATCCTGGCTCGTGGAGCTTGCGGTGCATTTATATCAGGATTTATGACATTTATGTCAATTGGAGGCTTTCCATCATATATTGAAGAAATGAAGGTTTTCTATCGGGAAAGACTTAATGGATATTATGGAGTTGCAGCATATATTTTATCCAACTTCCTTTCTTCTTTCTCATTCTTGGTTGCAATTGCTCTTACTACTAGCACCATTACTTATAACATGGTGAAATTCCGGCCAGGATTTATTCACTTTGTGTTTTTCACTCTCAACATCTTTGGCTGCATAGCTGTAATAGAGAGCCTCATGATGGTCGTAGCTTCGCTTGTTCCTAATTTCCTTATGGGAATAATTACAGGGGCTGGAATAATTGGAATCATGATGATGACCTCTGGATTCTTCAGGTTGCTGTCAGATCTTCCAAAGCCGGTTTGGCGCTACCCGATATCATATATCAGTTATGGCTCCTGGGCAATACAGGGTGCCTACAAGAATGACTTGCTTGGGCTAGAGTTCGATCCTCTGATACCTGGAGACCCAAAACTGAGGGGTGATTATATCATCACACACATGTTGGGCATACAACTAGATCATTCTAAATGGTTGGACTTGGCACTTCTATATGTCATTCTCATATGTTACCGAATTCTTTTCTTTATTGTTCTGAAGTTTATGGAGAGAGCTTCGCCATTATTTCAAAGACTTCAAGCTAAGAGAACACTACAACAGCTTGAAAAGAGACCTTCTTTCAGGAAAATGCCTTCTTTCCCTTCAATGAGGCATCAACCTCTCCATTCACTGTCTTCTCAGGAGGGTCTTAACTCACCACTCCACTAG 2202 0.4155 MTAPLVNLGRSIEYFTNPNWVRFVVWYLLSITPLQATMEIEAAGASNKGRRNAASSMGASEAAEPYGGLDRGSCLVWEDLTSMLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNIFLNGKKKRLDYGEVAYVTQEDVLLGTLTVRETISYSAHLRLPTSMTKEEVSGIIEGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIHDVPNSSDPFMNLATAEIKAMLIEKYRRSGYARRTKDRIRELSNIEVLETETQSGSQASWWKQLLTLTRRSFLNMCRDVGYYWLRIIIYIIVSICVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSYIEEMKVFYRERLNGYYGVAAYILSNFLSSFSFLVAIALTTSTITYNMVKFRPGFIHFVFFTLNIFGCIAVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGSWAIQGAYKNDLLGLEFDPLIPGDPKLRGDYIITHMLGIQLDHSKWLDLALLYVILICYRILFFIVLKFMERASPLFQRLQAKRTLQQLEKRPSFRKMPSFPSMRHQPLHSLSSQEGLNSPLH 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2713 733 FunFam ABC transporter G family member 11 69 313 - -
Glsi10g2713 733 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 319 IPR003439 GO:0005524
Glsi10g2713 733 MobiDBLite consensus disorder prediction 706 733 - -
Glsi10g2713 733 Pfam ABC-2 type transporter 411 620 IPR013525 GO:0016020|GO:0140359
Glsi10g2713 733 ProSitePatterns ABC transporters family signature. 219 233 IPR017871 GO:0005524|GO:0016887
Glsi10g2713 733 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 308 IPR027417 -
Glsi10g2713 733 CDD ABCG_EPDR 75 301 - -
Glsi10g2713 733 MobiDBLite consensus disorder prediction 716 733 - -
Glsi10g2713 733 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 68 702 - -
Glsi10g2713 733 Gene3D - 77 313 IPR027417 -
Glsi10g2713 733 Pfam ABC-2 type transporter 276 332 IPR043926 GO:0140359
Glsi10g2713 733 SMART AAA_5 105 276 IPR003593 GO:0016887
Glsi10g2713 733 Pfam ABC transporter 96 247 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2713 Glsi-ChrGlsi10 47593522 47603556 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2713 91 288 Calmodulin-binding Proteins AT2G36910 29.680 2.10e-12 68.9