Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2710 ATGTTTCAAGATGAAGGGTCGTCTTCTGTAACTTCATCACCTCTAAAGTTCTTTTCGATGATGTCACCTTCACCTAGCTTAGGATCTCCGTACCCATGGCTTAGAGAACTTAAATCCGAGGAAAGGGGCTTGTACTTGATCCATTTGTTGCTCACTTGTGCAAATCATGTAGCCGCTGGTAGTCTTGAAAATGCAAATATCGCCCTCGAGCAAATTTCCCAGCTTGCTTCCCCTGACGGTGATACCATGCAGCGAATTGCTGCATATTTTACTGAAGCACTTGCTGATCGGATACTTAAAACATGGCCTGGTCTCCACAAAGCCCTTAACTCCACAAGAATAGTCATGATTTCTGAAGAAATTCTGGTCCGGAAGCTATTCTTTGAGCTGTTCCCGTTCTTGAAGGTAGCATTTGTGCTTACAAATCAGGCCATCGTTGAAGCCATGGAAGGGGAAAAGATGGTTCATATAATTGATCTCAATGCTGCTGAACCTGCACAGTGGATTGCACTCCTCCAAGTTTTGAGTGCACGACCTGAAGGCCCTCCCCACTTGAGAATTACTGGAATTCATCAACAGAAAGAGATTCTGGATCAGATGGCTCATAGACTGACTGAAGAAGCAGAAAAGTTGGATATCCCATTCCAATTCAATTCCGTAGTCAGCAAATTAGAAAATCTTGATTTTGACAAACTCCGTGTAAAAACTGGGGAAGCACTAGCAATCAGCTCTATTCTCCAATTACATTCCCTTTTGACATTTGATGATGAAGCTTTGCGGAGAAGATCTCCTCTCCTGTCAAAAACCTCAAATGGAAATCATCTACAAAGAGTCCTGCCAACGAACCAGAGCACTTTGGGTGATTTGCTTGAGAAATATATGGTTGATGGATACAGTCCAAGTCCTGACTCAGCCTCATCATCACCAGCATCTTCAACTACTTCAATGAGTATGGAGAGCTTTCTTAATGCCTTGTGGGGTTTGTCTCCAAAAGTCATGGTTGTAACAGAACAAGATTCTAACCATAATGGTTCAACTCTGATGGAGAGGCTACTAGAAGCTTTATATTCTTACGCAGCATTATTTGATTGTTTGGAGTCTACAGTGTCAAGAACGTCTTTGGAGAGATTAAAGGTGGAGAAGATGCTGTTTGGTGAGGAAATCAAGAACATTGTTGCATGTGAGGGAGCTGAAAGAAAGGAAAGACATGAAAAGCTTGATAAATGGCTCCAGAGGCTTGATTTAGCTGGGTTTGGGAATGTTCCTTTAAGCTATTATGGGATGTTGCAGGCAAGGAGGTTACTGCAGAGCTATGGTTGTGAGGGATACAAGATGAGGGAGGAAAACGGTTGTGTTGTGATTTGCTGGCAGGATAGGTCCCTCTTTTCAATATCAGCTTGGAGATCTAGGAAGTAA 1416 0.4273 MFQDEGSSSVTSSPLKFFSMMSPSPSLGSPYPWLRELKSEERGLYLIHLLLTCANHVAAGSLENANIALEQISQLASPDGDTMQRIAAYFTEALADRILKTWPGLHKALNSTRIVMISEEILVRKLFFELFPFLKVAFVLTNQAIVEAMEGEKMVHIIDLNAAEPAQWIALLQVLSARPEGPPHLRITGIHQQKEILDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSILQLHSLLTFDDEALRRRSPLLSKTSNGNHLQRVLPTNQSTLGDLLEKYMVDGYSPSPDSASSSPASSTTSMSMESFLNALWGLSPKVMVVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTSLERLKVEKMLFGEEIKNIVACEGAERKERHEKLDKWLQRLDLAGFGNVPLSYYGMLQARRLLQSYGCEGYKMREENGCVVICWQDRSLFSISAWRSRK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2710 471 ProSiteProfiles GRAS family profile. 37 468 IPR005202 -
Glsi10g2710 471 Pfam GRAS domain family 46 468 IPR005202 -
Glsi10g2710 471 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 42 463 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2710 Glsi-ChrGlsi10 47422507 47423922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2710 1 471 GRAS Transcription Factor Family AT1G50420 69.439 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi10g2710 GRAS 2.5e-141 CL0063