Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2676 ATGGCTACCCAAGCTCTGGTATCCTCATCGTCTCTCACCTCCTCGGTGCAGGCTGCCAGACAGATTCTCGGAGGAAAACCACTCCAACACCCCATTGGGTCCTCCAGAAAAGCCTCCTTTGTAGTTAAGGCAGCTTCTACACCCCCTGTCAAGCAAGGAGCAGATAGACCTTTGTGGTTTGCATCGAAACAGAGTCTTTCTTACTTGGATGGCAGCCTTCCTGGTGACTATGGATTTGACCCTCTAGGACTCTCAGATCCTGAAGGACCAGGAGGGTTCATTGAACCCAGATGGTTAGCATATGGTGAGGTCATCAATGGGCGTTATGCAATGTTGGGTGCTGTTGGTGCCATAGCACCTGAGATTCTTGGCAAGGCTGGCCTAATTCCCGAGGAAACAGCACTCCCTTGGTTCAAAACTGGTGTAATTCCACCAGCAGGAACGTACAATTACTGGGCAGACCCTTACACACTCTTTGTCTTTGAGATGGCTCTCATGGGATTTGCAGAGCACAGGCGATTTCAAGACTGGGCCAATCCTGGGTCCATGGGGAAGCAGTACTTCTTGGGGCTAGAGAAAGGTTTGGGAGGTTCTGGAGACCCTGCTTACCCTGGAGGACCCTTTTTTAACCCTCTTGGTTTTGGCAAGGATGAGAAATCCTTAAGGGACTTGAAGCTCAAGGAAGTAAAGAATGGGAGGTTGGCTATGTTGGCAATCTTGGGTTACTTTGTCCAGGGTCTTGTGACAGGAGTTGGACCCTACCAAAACCTTCTGGATCATTTGGCTGACCCTGTGCACAACAACGTCTTGACCAGCCTCAAGTTCCACTAA 831 0.5006 MATQALVSSSSLTSSVQAARQILGGKPLQHPIGSSRKASFVVKAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGPGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPEETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSLRDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVHNNVLTSLKFH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2676 276 Pfam Chlorophyll A-B binding protein 67 245 IPR022796 -
Glsi10g2676 276 Gene3D Chlorophyll a/b binding protein domain 58 275 - -
Glsi10g2676 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
Glsi10g2676 276 FunFam Chlorophyll a-b binding protein, chloroplastic 57 275 - -
Glsi10g2676 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 10 271 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2676 Glsi-ChrGlsi10 45812281 45813378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2676 19 276 Chloroplast and Mitochondria Gene Families AT1G61520 87.984 2.04e-168 465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g2676 10 45812281 45813378 Glsi10g2676 10 45812281 45813378 ECH