Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2668 ATGGCTCTTTCTAGTTTGACATTATACAAAGGTAAGCATGCTTTGGTCAAAGGTAAAACTAACACTGGGAAAAGTGCAGCATTTTTGCTTCCTACTATTGAAACAGTTTTGAAAGCAATGAGTAGAAATTCCATTAAACATGTGCCTCCAATACTTGTTCTTATTCTCTGCCCAACCAGAGAGCTTGCTAGTCAAATTGCTGTTGAATTAAAGGTTTTGCTAAAGTATTATGATAACATTGGGGTGCAGACTCTAGTAGGAGGCGTTCAGTTTAAAGATGACCAAAAACGTCTTGAATCAGACCCATCCTAG 312 0.3782 MALSSLTLYKGKHALVKGKTNTGKSAAFLLPTIETVLKAMSRNSIKHVPPILVLILCPTRELASQIAVELKVLLKYYDNIGVQTLVGGVQFKDDQKRLESDPS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2668 103 Gene3D - 2 103 IPR027417 -
Glsi10g2668 103 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 5 103 IPR014001 -
Glsi10g2668 103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 102 IPR027417 -
Glsi10g2668 103 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 4 102 - -
Glsi10g2668 103 Pfam DEAD/DEAH box helicase 7 100 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2668 Glsi-ChrGlsi10 45439349 45440108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2668 10 100 Eukaryotic Initiation Factors Gene Family AT1G72730 31.868 1.48e-06 43.1