Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2649 ATGCTTCAAAGCTTGGTCCCTCGATCCTCCCTCAGCGCGAACCCTGACGGTAGCTCCTCCATGAAGACCAAGCGCGTGGACCGCGAGCTCGACCACGGTGATGATCCTTCGTCATTCAAGAGGCCGAGCACTGGTAGAAATTTCTCCGGGGAAGTCTCAGTCTCTGGTGAGAAGACGGTGAAGGAAGGCGAGGGGCACGAGGAGCAACCACCCTTCGAAGGTACTGAGTCAACCGGCCTCAGACTCCTCGGACTTTTGCTACAATGCGCGGAGTGCGTCGCCATGGACAACCTCGATGATGCCAGCGACCTCTTGCCGGAGATAGCAGAGCTGTCTTCGCCGTACGGGACGTCGCCGGAGCGCGTTGGCGCGTACTTTGCACACGCGCTGCAGGCCCGCGTCGTTAGCTCCTGCCTTGGCACTTACTTGCCCCTCACCGCGAAGTCGCTCACCCTGACTCACTCTCAGCAAATATTTAACGCGTTCCAATCCTACAACTCAGTTTCTCCCCTAGTAAAGTTCTCACACTTCACTGCCAACCAAGCTATCTTCCAGGCCCTGGACGGCGAGGATTGCGTCCACCTCATCGACCTCGACATAATGCAAGGCCTTCAATGGCCAGGATTGTTCCACATCCTCGCCTCGCGGTCCAAGAAGATCCGCTCCATAAGGATAACCGGGTTCGGGTCCTCCTCCGAGTTGCTCGAGTCAACGGGGCGGAGACTCGCCGACTTCGCGAGTTCACTTGGGTTGCCGTTCGAGTTCCACCCTCTGGAGGGCAAAATCGGAAATATAACCGATCTGAGTCTACTCGGGGTGAGACCCAACGAGGCCATAGTGGTCCATTGGATGCACCATTGCTTGTATGATATTACTGGGAGTGATTTAGGGACGCTAAGATTGTTGACTTTGCTGAGGCCGAAGCTAATTACAATCGTTGAACAGGATCTGAGCCACGCGGGGAGTTTTCTCGCGAGGTTCGTAGACGCCTTGCATTATTATAGTGCGTTGTTCGACGCGCTCGGCGATGGATTGAGTATGGACAGCATGGAAAGGCATACAGTGGAGCAGCAGCTGTTCGGGAGCGAGATAAGGAACATTGTGGCTGTGGGTGGACCCAAGAGAACCGGGGAGGTGAAGGTGGAGAGATGGGGCGAACAGTTGAATCGGGTCGGGTTTAGACCCGTTTCTCTAAGGGGAAACCCGGCTTCCCAGGCCAGCTTGTTACTGGGTATGCACCCTTGGAGAGGATACACGCTGGTGGAGGAGAATGGATGCCTCAAGTTGGGGTGGAAGGATCTTTCTCTGCTGACTGCCTCTGCTTGGCAGCCGTCTGATTAG 1341 0.5585 MLQSLVPRSSLSANPDGSSSMKTKRVDRELDHGDDPSSFKRPSTGRNFSGEVSVSGEKTVKEGEGHEEQPPFEGTESTGLRLLGLLLQCAECVAMDNLDDASDLLPEIAELSSPYGTSPERVGAYFAHALQARVVSSCLGTYLPLTAKSLTLTHSQQIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDCVHLIDLDIMQGLQWPGLFHILASRSKKIRSIRITGFGSSSELLESTGRRLADFASSLGLPFEFHPLEGKIGNITDLSLLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLTLLRPKLITIVEQDLSHAGSFLARFVDALHYYSALFDALGDGLSMDSMERHTVEQQLFGSEIRNIVAVGGPKRTGEVKVERWGEQLNRVGFRPVSLRGNPASQASLLLGMHPWRGYTLVEENGCLKLGWKDLSLLTASAWQPSD 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2649 446 ProSiteProfiles GRAS family profile. 73 443 IPR005202 -
Glsi10g2649 446 MobiDBLite consensus disorder prediction 1 20 - -
Glsi10g2649 446 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 66 438 IPR005202 -
Glsi10g2649 446 MobiDBLite consensus disorder prediction 57 71 - -
Glsi10g2649 446 MobiDBLite consensus disorder prediction 21 39 - -
Glsi10g2649 446 MobiDBLite consensus disorder prediction 1 76 - -
Glsi10g2649 446 MobiDBLite consensus disorder prediction 40 54 - -
Glsi10g2649 446 Pfam GRAS domain family 84 443 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2649 Glsi-ChrGlsi10 44678150 44679490 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2649 21 446 GRAS Transcription Factor Family AT5G41920 65.197 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi10g2649 GRAS 4.5e-112 CL0063