Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2646 ATGCATTACTCTAATTACACTATATTAACCCACCACAGCATCCCGGAGATCTCTGGAAGGGCCGCTGCTCTACATTTCTGTCCTCGGCAAGCAGACACTACTTTTCGCCGTGATTGTCCTGTAGAGAATGCGATCTGCCCAATACTGACGGAGCTGGAAGCTAACGGGATACGATTGCAATTCAGAATGACGTTGTTTCTATTGAAACTTGGGATATTTTTCTCGGCTTTTCTGCTTTCGTTTTCTCCCTCGCAATCTGCTGTTTTTAGTGTAGATCTGGGGTCTGACTGGCTCAAAGTAGCGGTCGTAAACCTTAAACCTGGACAGAGTCCTATTTCAATAGCAATCAATGAGATGTCCAAGCGGAAATCTCCGGTCTTAGTGTCATTTCATTCTGGTGATCGCCTACTAGGAGAAGAAGCAGCCGGTCTGGTGGCTCGGTATCCTCAAAACGTCTATTCCCAGCTCAGGGACTTGATTGGAAAACCGTATAATTTTACCAGGAAGTTTTTGGATTCGAAGTACTTGCCATTTGAAATCAAGGAAAATTCAAGAGGCACTGTGAGTTTCAAAGTCGACGATCATGACACTGAGTATTTGGCTGAGGAATTGGTGGCAATGATTCTGAGCTATGCTGTAAATTTAGCGGAGTTCCATTCAAAAGTTCCTATCAAAGATGCCGTAATCACGGTACCGCCTTACTTTGGCCAAGCTGAACGAAATGGGTTGCTTCAGGCAGCACAATTGGCAGGAATTAATGTCCTATCTTTGATAAATGAGCATTCTGGTGCCGCATTACAATATGGGATTGATAAGGACTTTTCAAATGGGTCAAGGCATGTTATATTCTACGACATGGGTTCAAGCAGTACCTATGCTGCCCTTGTGTATTTCTCGGCGTATACAAGTAAAGAATATGGAAAGACAGTGTCAATTAATCAGTTTCAGGTTAAGGATGTCCATTGGAATCCAGAGCTAGGTGGCCAGGATATGGAATTGCGATTGGTGGAGTACTTTGCTAGTGAATTTAATAACCAAGTTGGTGATGGAGTTGATGTGAGAAAGTTTCCCAAGGCGATGGCTAAATTAAAGAAACAGGTTAAACGAACCAAAGAAATTCTTAGTGCAAACACAGTGGCTCCAATTTCTGTTGAATCGCTTCATGGTGACATGGACTTCCGGAGTACTATTACCCGTGAGAAGTTTGATGAGCTTTGTGAGGATATATGGCAAAAATCTCTTTTGCCTGTGAAAGAGGTGTTTGAAAATTCTGGCTTGGCAGCAGACCAGATACATGCAGTGGAGTTGCTAGGAGGTGCTACCAGAGTGCCAAAATTACAGGCTAAGCTTCAAGAGTTCCTTGGGAGGAAAGAACTTGATAGACATCTTGATGCTGATGAAGCTATAGTTCTTGGTGCAGCTCTCCATGCTGCAAATTTAAGTGATGGAATCAAATTAAACCGTAAGCTAGGAATGGTTGATGGTTCAATGTATGGATTTGTGGTTGAGTTGGATGGTCCTGATCTTTTGAAAAATGAAAGCTCTAAGCAGCTACTTGTACCACGAATGAAAAAACTACCAAGCAAGGTGTTCAGATCCATTAAGCATAACAAAGATTTTGATGTTTCACTAGCTTACGAGAGTGAAAATCTATTGCCACCTGGTGTTACCTCTACCGAAGTTGCTCGATATCAAATATCTGGTTTGACAGATGCTAGTGAGAAGTACTCATCTCGAAATTTGTCCTCGCCCATAAAGGCAAATCTACATTTCTCTCTAAGTAGAAGTGGAATTCTTTCTTTGGATCGGGCAGATGCCGTTATTGAAATATCAGAGTGGGTGGAGGTTCCTAGAAAGAATCTGACAATAGAGAATACTACTTCTGATTCTTCAAACTTATCAATGGAAACTGGTGGTAGGAACAGTTCTGGGGAAAGCAATGAAAATTTGCCCAATGATGGAGGGATTAGTAAGACATTCAATGTTGGTGTAGAGGAGCAAGCTGCTGCAGATACTGGTACGGAGAGAAAGTTGAAAAAGCGGGCGTTTAGGGTTCCATTGAAGATTGTTGCAAGGATGGTGGGATCTGGGATGCCTTTATCAAAAGAGTTTCTTGCTGAAGCTAAAGGCAAATTAGAGGCGTTGGACAAAAAAGATGCAGAAAGAAGAAGAACAGCAGAATTAAAAAATACTTTGGAAGGATATATATATACAACTAAGGAAAAGATTGAAACTTATGAAGATTGTGCAAAAGTTTCTACTAGTGATGAGCGCCAGTCCTTTGTTGAGAAGCTTGATCAGGTGCAAGATTGGTTGTATACAGATGGTGAAGATGCCAATGCTACAGAGTTTCAAGAGCATCTAGATATGTTAAAAGCAGTAGGTGATCCAATTTTCTTCAGGTTGAAGGAGCTCACAGCTCGACCAGTGGCAGCTGAGCATGCTCGTAAATACCTTAATGAGCTGCAGCAGATTGTACAAGTCTGGAAGACAGATAAGTCTTGGCTACCAAAAGAACAAATAGACGAGGTTCTAAATTATGCTGAAAAGCTAACGAATTGGTTGGATGAGAAGGAGGCGGAGCAGAAGAAGACTTCTGGATTTAGTACGCCAGCATTTACTTCTGAAGAAGTATATCTGAAGTTGTTTGATCTGCAAAACAAGGTTACCAATATTAATAGAATCCCCAAGCCGAAGCCTAAAATCCAGAAACCTATAAAGAATGAAACTGAGAGCAGTAAGCAGAAGATGGACATTTCTAACACCACCTCGGCTGATGGTTCTCCCCAAGGCGATCAACCAGCTAACGACTCAGAAGACTCGAGAGATGAAACAGTTGATGAGCAAACGAATGTTCATGATGAGTTATGA 2871 0.418 MHYSNYTILTHHSIPEISGRAAALHFCPRQADTTFRRDCPVENAICPILTELEANGIRLQFRMTLFLLKLGIFFSAFLLSFSPSQSAVFSVDLGSDWLKVAVVNLKPGQSPISIAINEMSKRKSPVLVSFHSGDRLLGEEAAGLVARYPQNVYSQLRDLIGKPYNFTRKFLDSKYLPFEIKENSRGTVSFKVDDHDTEYLAEELVAMILSYAVNLAEFHSKVPIKDAVITVPPYFGQAERNGLLQAAQLAGINVLSLINEHSGAALQYGIDKDFSNGSRHVIFYDMGSSSTYAALVYFSAYTSKEYGKTVSINQFQVKDVHWNPELGGQDMELRLVEYFASEFNNQVGDGVDVRKFPKAMAKLKKQVKRTKEILSANTVAPISVESLHGDMDFRSTITREKFDELCEDIWQKSLLPVKEVFENSGLAADQIHAVELLGGATRVPKLQAKLQEFLGRKELDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMVDGSMYGFVVELDGPDLLKNESSKQLLVPRMKKLPSKVFRSIKHNKDFDVSLAYESENLLPPGVTSTEVARYQISGLTDASEKYSSRNLSSPIKANLHFSLSRSGILSLDRADAVIEISEWVEVPRKNLTIENTTSDSSNLSMETGGRNSSGESNENLPNDGGISKTFNVGVEEQAAADTGTERKLKKRAFRVPLKIVARMVGSGMPLSKEFLAEAKGKLEALDKKDAERRRTAELKNTLEGYIYTTKEKIETYEDCAKVSTSDERQSFVEKLDQVQDWLYTDGEDANATEFQEHLDMLKAVGDPIFFRLKELTARPVAAEHARKYLNELQQIVQVWKTDKSWLPKEQIDEVLNYAEKLTNWLDEKEAEQKKTSGFSTPAFTSEEVYLKLFDLQNKVTNINRIPKPKPKIQKPIKNETESSKQKMDISNTTSADGSPQGDQPANDSEDSRDETVDEQTNVHDEL 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2646 956 Gene3D - 700 813 IPR029048 -
Glsi10g2646 956 MobiDBLite consensus disorder prediction 936 956 - -
Glsi10g2646 956 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 727 808 IPR029048 -
Glsi10g2646 956 ProSitePatterns Heat shock hsp70 proteins family signature 3. 434 448 IPR018181 -
Glsi10g2646 956 SUPERFAMILY Actin-like ATPase domain 88 272 IPR043129 -
Glsi10g2646 956 MobiDBLite consensus disorder prediction 915 935 - -
Glsi10g2646 956 FunFam Heat shock 70 kDa protein 4 700 812 - -
Glsi10g2646 956 FunFam Heat shock 70 kDa protein 4 327 412 - -
Glsi10g2646 956 PRINTS 70kDa heat shock protein signature 87 100 - -
Glsi10g2646 956 PRINTS 70kDa heat shock protein signature 119 131 - -
Glsi10g2646 956 PRINTS 70kDa heat shock protein signature 463 483 - -
Glsi10g2646 956 PRINTS 70kDa heat shock protein signature 431 447 - -
Glsi10g2646 956 PRINTS 70kDa heat shock protein signature 227 247 - -
Glsi10g2646 956 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 488 630 IPR029047 -
Glsi10g2646 956 MobiDBLite consensus disorder prediction 894 956 - -
Glsi10g2646 956 MobiDBLite consensus disorder prediction 625 658 - -
Glsi10g2646 956 CDD HYOU1-like_NBD 90 478 - -
Glsi10g2646 956 Gene3D Actin; Chain A, domain 4 327 412 - -
Glsi10g2646 956 Pfam Hsp70 protein 89 800 IPR013126 GO:0005524|GO:0140662
Glsi10g2646 956 Gene3D - 273 460 - -
Glsi10g2646 956 SUPERFAMILY Actin-like ATPase domain 278 480 IPR043129 -
Glsi10g2646 956 Gene3D - 154 207 - -
Glsi10g2646 956 MobiDBLite consensus disorder prediction 625 656 - -
Glsi10g2646 956 Gene3D - 91 478 - -
Glsi10g2646 956 PANTHER HSC70CB, ISOFORM G-RELATED 86 928 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2646 Glsi-ChrGlsi10 44513276 44551471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2646 84 481 Calmodulin-binding Proteins AT5G02500 31.920 6.11e-64 223