Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2619 ATGGAAGCAAACAAAGAGGAGGCGCTTAAAGCAATAGAGATTGCTGAGAAGCGATTTGCACAGAGAGATTTTGCAGGTGCAAAGGACTATGCATTAAAGGCCAAAACAATTTGTCCAGGGTTGGAGGGAATACCTCAAATGGTGGCCACGTTTCAAGTTTACATTGCTTCTGAGGTCCAATATAATGGCGAACTTGATTATTATTCAATTCTTGGAATAAAACCTTCAGCAGATAAAGAGACTGTCAAGAAACAGTACAAGAAGATGGCTGTGTTGCTTCACCCAGATAAGAACAAATGTGTGGGAGCTGATGGGGCATTTAAACTTGTGTCTGAAGCATGGACTTGGCTGTCAGATAGTGCTAAGCGAAGTTCTTATGATCTAAAACGAAATGCACAAGTGGCTTCAGGGATTATTCAGACAAATTTGTCGTCAGATCATGCCACGGGAACTACAGGCTATAACAAATGTTCCAATTTTTCAACCTCTCATGGTAGGCTTGACACTTTCTGGACCATTTGCACTTCTTGTAAAGTTCAGTATGAGTATCTACGCAAGTATGTTAATAAGAGACTTTCATGTAAGAACTGCCGTGGAACTTTCATTGCTATTGAAACTGGGGCAGCCCCAGCAAATGGTTCATTCCCATATTGTCCTTGGTCATATGTGCCAGGCAATGGCTATGGAAGTCATTCATTTGATGGAGTCACATATGTGCCAACTAGTACTACCTATTACAATGGCAATGGGGTAACCAGATACCATTCTCGACATGGATATGATTATGCTTCAAATGTTTCATTTCAGTGGAGCCCTGCTGGACAAATGAATCAAAATGGTTCAACCACCTTATCTGCTGATTCTGTTTATCAGGCCAATGGAAATGTGAAGAGAGGAAGATCAAGGGTCAAATCTGGAGTTGATCAGAGGCATCACATGGTAGAGACATCACTCAATGTAAATTCAGATGCATCATTCTCCTGTAATGAATCACAGGAAATTAAGTTCAATAGACCTGATAAGAAAAGGAAGGTTGTTGTGGGAGCCAGTTTCAAAAATGGCTTTGGAGAGAAGGAATCAAAATTTTCTTCTGAATCAAGATTAGCTGATGGGAATGAAAGCATTGGACATGGCCAGAAGCTTTCCTGTGCAAGTGAAGTTCAAACTAAACAGTGTTCCGTGGCACCCGCATTTGATGCTAGAAAATTACTAATTGAGAAGGCCAGGGCAGAAATTCAAAAGAAACTGGAAGAGTTGAAGTTGGCATCTGAAGCTGCTGCCGCTGCTATCGAGGAGAAAACAAAAGCAGAAGCTGAAGTTGGTCAATTCAAAAGAGAGGCATATAGAAGAGCAGGTGTAAATGTTTCTGGCCAACAATTAGAGCATAGGAAAACTGGCCCAATCTCAATAACTGTCCCAGATTCTGACTTTCATGACTTTGATAAGGATAGGTCAGAGGAATGCTTTAGGCCAAAGCAAATATGGGCTTTATATGACGAGGATGATGGCATGCCTCGTTTGTATTGTCTGATCCGTGAGATCATCTCTGTCAATCCATTTAAAATTCTTATTAGTTATTTGAATTCTAAAACTGATAGTGAATTTGGCCCAGTGAACTGGCTAGGTTCAGGTTTTACCAAATCTTGTGGAAACTTCAGGGCCTGCAACTCTGATATTGTTGATCAAGTTAATATTTTTTCTCATGTTCTAGTCCAGGAAAAGGCTGGTAGAGGTGGTTGTGTACGTATATATCCCAGATGTGGAGATATTTGGGCTGTTTATCGAAATTGGTCACCAGATTGGAATAGATCCACTTCAGATGAAGTGAGGCATCAGTATGAAATGGTAGAGGTTCTTGATGATTACTCTGAGGAACTTGGTGTTTGTGTTAGTCCTCTTATAAAGTTGGTTGGATTTAAAACAGTGTATCAGAGAAATACAGACAAAAGTGCCGTTAGATGGATACCAAGAAGAGAAATGTTATGCTTTTCACATCAAGTGCCTTCTTGGTTGCTGAAGGGAGAGACGGGCAATCTTCCAGAAAGGTGTTGGGACCTTGATCCAGCTGCTACTCCAGATGAGCTTCTTAATGCTGCAACAGGTGCAAATACATTTTAG 2118 0.4079 MEANKEEALKAIEIAEKRFAQRDFAGAKDYALKAKTICPGLEGIPQMVATFQVYIASEVQYNGELDYYSILGIKPSADKETVKKQYKKMAVLLHPDKNKCVGADGAFKLVSEAWTWLSDSAKRSSYDLKRNAQVASGIIQTNLSSDHATGTTGYNKCSNFSTSHGRLDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFIAIETGAAPANGSFPYCPWSYVPGNGYGSHSFDGVTYVPTSTTYYNGNGVTRYHSRHGYDYASNVSFQWSPAGQMNQNGSTTLSADSVYQANGNVKRGRSRVKSGVDQRHHMVETSLNVNSDASFSCNESQEIKFNRPDKKRKVVVGASFKNGFGEKESKFSSESRLADGNESIGHGQKLSCASEVQTKQCSVAPAFDARKLLIEKARAEIQKKLEELKLASEAAAAAIEEKTKAEAEVGQFKREAYRRAGVNVSGQQLEHRKTGPISITVPDSDFHDFDKDRSEECFRPKQIWALYDEDDGMPRLYCLIREIISVNPFKILISYLNSKTDSEFGPVNWLGSGFTKSCGNFRACNSDIVDQVNIFSHVLVQEKAGRGGCVRIYPRCGDIWAVYRNWSPDWNRSTSDEVRHQYEMVEVLDDYSEELGVCVSPLIKLVGFKTVYQRNTDKSAVRWIPRREMLCFSHQVPSWLLKGETGNLPERCWDLDPAATPDELLNAATGANTF 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2619 705 PRINTS DnaJ domain signature 102 122 IPR001623 -
Glsi10g2619 705 PRINTS DnaJ domain signature 68 86 IPR001623 -
Glsi10g2619 705 PRINTS DnaJ domain signature 86 101 IPR001623 -
Glsi10g2619 705 Pfam Domain of unknown function (DUF3444) 469 675 IPR024593 -
Glsi10g2619 705 Coils Coil 402 446 - -
Glsi10g2619 705 PANTHER BNAC03G44070D PROTEIN 1 692 - -
Glsi10g2619 705 Gene3D DnaJ domain 64 173 IPR036869 -
Glsi10g2619 705 SMART dnaj_3 65 122 IPR001623 -
Glsi10g2619 705 SUPERFAMILY Chaperone J-domain 56 131 IPR036869 -
Glsi10g2619 705 CDD DnaJ 66 119 IPR001623 -
Glsi10g2619 705 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Glsi10g2619 705 Pfam DnaJ domain 66 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2619 Glsi-ChrGlsi10 40358333 40360450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2619 4 304 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.124 4.51e-31 123