Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2612 ATGCGCCGTACCGTGAAGAGTGCTCCCCAAAGCATCTGGTATGGCCCTGATCGTCCCAAGTACTTGGGTCCCTTCTCCGACCAAATTCCATCATACTTGACTGGCGAATTTCCTGGTGACTATGGATGGGATACTGCAGGATTATCAGCTGATCCTGAGACCTTCGCCAGGAACCGCGAGCTTGAGGTGATTCACTGCAGATGGGCCATGCTTGGTGCACTGGGCTGTGTCTTCCCAGAAATCCTTGAAAAGAATGGCGTCAAGTTTGGTGAGGCAGTGTGGTTCAAGGCTGGTGCTCAGATCTTCTCTGAAGGTGGCCTTGACTATCTGGGTAACCCAAACCTCATTCATGCTCAGAGCATCCTTGCAATATGGGCTGTTCAGGTTGTGCTCATGGGGTTTGTTGAAGGCTACAGGGTTGGTGGAGGGCCGCTTGGTGAAGGACTAGACCCAATCTACCCTGGTGGTGCCTTTGACCCACTCGGTCTGGCTGATGACCCTGATGCATTTGCGGAGTTGAAGGTGAAGGAGATCAAGAATGGAAGATTGGCAATGTTCTCCATGTTTGGGTTCTTTGTTCAAGCCATTGTTACTGGCAAGGGCCCTATTCAGAACCTTTTTGACCATGTTGCTGATCCTGTGGCCAACAATGCATGGGCTTACGCTACTAACTTTGTCCCTGGTCAATGA 690 0.5101 MRRTVKSAPQSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLFDHVADPVANNAWAYATNFVPGQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2612 229 SUPERFAMILY Chlorophyll a-b binding protein 12 226 - -
Glsi10g2612 229 Gene3D Chlorophyll a/b binding protein domain 20 222 - -
Glsi10g2612 229 Pfam Chlorophyll A-B binding protein 30 195 IPR022796 -
Glsi10g2612 229 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 228 IPR001344 GO:0009765|GO:0016020
Glsi10g2612 229 FunFam Chlorophyll a-b binding protein, chloroplastic 20 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2612 Glsi-ChrGlsi10 39885450 39886994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2612 1 229 Chloroplast and Mitochondria Gene Families AT2G05070 90.393 2.33e-160 442