Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2601 ATGCAAGCATCACAGCATCATAATAGCTCAACTGTGTACCATCAACCAATGCAACGAATTGAGACCTACTGCTTGCCACATGATAGGACATTAAATCATCAGCTATACTACAATGATGTAAGCCATGGCACCCACTTTTTTATACCGAGTTATTCTGAACTTTACAGCACCTTGGAATCCTCCTCTGCAATTGGCAATTTCACTGTCGACAATTTCCCTTCAAATGTTAGCTTCTCACCTGGCGAAAGCCCAGTATCACAGCAAGATTCTCAGCCATATTCATACCCACCTAACCAGCATCATTCCCCAGACAATACCTATGATTCTCCTATGAGTGGCTCCTGTATAACTGATGATTTAAATAGCTTTAAGCACAAGTTAAGAGAGTTGGAAAGTGTAATGCTTGGCCCTGATTCTGATATTCTTGACAGCTATGACAGTGCCTTCAAGGATGGAAAAAACATTGTCTCACCTGAGATGGACAGCTGGGAACAAACAGTGGTAGCAATTTCTAGTAGGGACCTAAAACAAGTCCTAGTTGCATGTGCGAAAGCAGTTGCAGACAGTGATTTGTTAATGGGACAATGGTTGATGGACGAGCTACGACAGATGGTGTCAGTTTCTGGTGAACCAGTTCAAAGGTTGGGTGCATACATGTTGGAAGGGCTTGTGGCACGGTTGTTTGCCTCTGGTAGTTCAATCTACAAAGCTCTGAGATGTAAGGAACCAGAATGCGCAGAGCTCCTTTCATACATGCACATACTTTATGAGGCTTGCCCCTACTTCAAATTTGGATACATGTCTGCAAATGGAGCCATTGCAGAAGCTATGAAAGATGAAGATAGAGTTCATATCATTGATTTCCAAATATCTCAAGGAAGTCAATGGGTCACTTTAATTCAGGCATTTGCAGCTAGGCCTGGGGGGCCACCTCATATCCGGATAACCAGTATTGATGATCAAACATCAGCTTATGCCCGGGGAGGAGGACTGCATATTGTAGGAAAGAGGCTATCTAAGCTTGCTGATCAATTTAAGGTGCCATTTGAATTTCATGCTGTTGCTATCTCTGGTTGTGAGGTTCAGCTACATAACCTTGGGGTTCGACCAGGAGAGGTTTTGGCTGTGAATTTTGCGTTCATGCTACATAACATGCCCGATGAGAGTGTCAGCACTGAGAATCATAGGGACAGACTGTTGCACTTAGTGAAGAGCCTGTCTCCAAAGGTGGTGACACTTGTTGAGCAAGAATGTAACACAAACACTGCTGCATTTTTTCCACGATTCCTTGAAACTCTGGACTACTACACAGCCATGTTTGAGTCAATAGATGTGACTCTTCCCAAAGAGCATAAAGAGCGGATCAATGTTGAGCAGCATTGCCTAGCAAGAGATGTTGTCAACATTATAGCTTGTGAAGGGGTTGAGAGGGTGGAACGACATGAGCTACTTGGCAAATGGAGGTCAAGATTTGCAATGGCTGGTTTCACTCCTTACCCTTTGAGCTCATTGGTGAATGGTACCATTAAGAAATTACTTGATAACTACTCTGATAGATATAGACTTCAAGAGAGAGTTGGTGCTCTTTATCTTGGTTGGATGAATAGAGATTTAGTTACTTCTAGTGCATGGAAGTGA 1638 0.4304 MQASQHHNSSTVYHQPMQRIETYCLPHDRTLNHQLYYNDVSHGTHFFIPSYSELYSTLESSSAIGNFTVDNFPSNVSFSPGESPVSQQDSQPYSYPPNQHHSPDNTYDSPMSGSCITDDLNSFKHKLRELESVMLGPDSDILDSYDSAFKDGKNIVSPEMDSWEQTVVAISSRDLKQVLVACAKAVADSDLLMGQWLMDELRQMVSVSGEPVQRLGAYMLEGLVARLFASGSSIYKALRCKEPECAELLSYMHILYEACPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGSQWVTLIQAFAARPGGPPHIRITSIDDQTSAYARGGGLHIVGKRLSKLADQFKVPFEFHAVAISGCEVQLHNLGVRPGEVLAVNFAFMLHNMPDESVSTENHRDRLLHLVKSLSPKVVTLVEQECNTNTAAFFPRFLETLDYYTAMFESIDVTLPKEHKERINVEQHCLARDVVNIIACEGVERVERHELLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLDNYSDRYRLQERVGALYLGWMNRDLVTSSAWK 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2601 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 146 539 IPR005202 -
Glsi10g2601 545 MobiDBLite consensus disorder prediction 78 111 - -
Glsi10g2601 545 Pfam GRAS domain family 175 545 IPR005202 -
Glsi10g2601 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2601 Glsi-ChrGlsi10 39500603 39502240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2601 91 545 GRAS Transcription Factor Family AT5G48150 73.536 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi10g2601 GRAS 5.2e-136 CL0063