Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2585 ATGTCTTCTTCATCTTCTGCTTCACCATCGTTACCAACTTCACCTTCAACCCCAGATGACACTGGCAATAATTTTGGTGCTGATCCTGGCCCTAGCACAAGAAGAACCGGTGATTTTGAAGCGCCATCTTCTTCTCGTCGACGTGCTATGTATGAGGTCTGGCCAGAGGATTTGGTTGAAGTATTAGCCACCCAAGTCGCCATTGATGCTGCTCGTTCTGGTGGACGCCTCGCTGCCGCCCCTGCCCTTGCTAATATATTTCAGGTTTGTCCTACTTGGCGAGCTGTCTCCCGCTCCCGTAGCCTGTGGGAGGGGCTCACCAGAGGCATCTGGTGCCGCACCCATCCAATGCGCCCCACGTGGCACGAAGAGTACATCCACTGGCATCGAATGGCCAGGAATTTCGTTACTGGCAGATACTCCTATACATCCCTGCACTTTGACCCATCCGACGTGGATGGTGACCCCGACACCCTCACCTGCAGGTGTCTCACCCTCTCCGATGTCCACCTCGCCTGTGGCTTCGCCGACGGCACTGTCCGCCTCTTCGAACTTGAAACTCGCGACCACGTTAGCACATTCCGCTCTTACCAAGGCGACCGGTTCGGGCCGTTCTCGAGGTCTGTTTCCGGTATCGTGATCACCAACACCAGGCTTGTCTTTGCCACACTGGACGGGGACATCTACGTAGCAATCCTCAATGGGCAAAATCAAATTCGTAGGGCCCGAGAAGGTGATGTGGTCAACAGTGGAGTATTGGTGGAGTTCGCAGGATGTCGCCGCTGGTGGGTGGGCCTCTTCGCCGGAGTTCCGGGTCAGGCATTCCAGATTTGGGACGCTCACACCGAAGAAACCGTATTCATTGGTGGATCCTTGACCGACCCCGAAACGGTCATGGGCTGGCACATGTTGACAGAGTTGACTGAACCGGTGGGTCGCCTCCGTGTCACGAACCGGGAACTGGCCGTGGCGTGCACGACTTCACAACTCATAGTGTTTGACTTGAGGAACCCAGGGATTCCATTGCATGAGCTTTGGTCCAATGCAGGCTTCATTGTAACCTCGCTGGACGTGAGCCAGGACACCTTCTTTATCGTGGAAAGGAATGGGGAGGCTAAGGTGCACCACGCGAGCACGCTGGAGCAGTTATGCGAATTCCGTTTGAGAGATGCATCTTTGAGGGGTTTAATGGGATGTAAGAACATGGGGTTCGCACTAACATGCGCCGGGGGAATGATAAGGATATGGGACGTGGAGCGCCGGGTGGAGCGCCGGCATTTGGTTCTCGGAGAAAGGGTTGGGGAGGCAAACGCCATGGTTTGCAATGAGAGACACGTGGCGTTGTCATGTAATGACGCGTCAATTCACTTATGGGATTTCGATGTATATTAG 1392 0.5467 MSSSSSASPSLPTSPSTPDDTGNNFGADPGPSTRRTGDFEAPSSSRRRAMYEVWPEDLVEVLATQVAIDAARSGGRLAAAPALANIFQVCPTWRAVSRSRSLWEGLTRGIWCRTHPMRPTWHEEYIHWHRMARNFVTGRYSYTSLHFDPSDVDGDPDTLTCRCLTLSDVHLACGFADGTVRLFELETRDHVSTFRSYQGDRFGPFSRSVSGIVITNTRLVFATLDGDIYVAILNGQNQIRRAREGDVVNSGVLVEFAGCRRWWVGLFAGVPGQAFQIWDAHTEETVFIGGSLTDPETVMGWHMLTELTEPVGRLRVTNRELAVACTTSQLIVFDLRNPGIPLHELWSNAGFIVTSLDVSQDTFFIVERNGEAKVHHASTLEQLCEFRLRDASLRGLMGCKNMGFALTCAGGMIRIWDVERRVERRHLVLGERVGEANAMVCNERHVALSCNDASIHLWDFDVY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2585 463 Gene3D - 265 462 IPR015943 GO:0005515
Glsi10g2585 463 Gene3D - 123 260 IPR015943 GO:0005515
Glsi10g2585 463 PANTHER WD40 REPEAT PROTEIN 12, 37 40 421 - -
Glsi10g2585 463 SUPERFAMILY F-box domain 83 130 IPR036047 GO:0005515
Glsi10g2585 463 MobiDBLite consensus disorder prediction 1 46 - -
Glsi10g2585 463 MobiDBLite consensus disorder prediction 1 30 - -
Glsi10g2585 463 SUPERFAMILY WD40 repeat-like 152 460 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2585 Glsi-ChrGlsi10 35187380 35192791 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Glsi10g2585 None None None