Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2548 ATGCCCCTGGTTTTCTCTTCAATGTTGGGAACCAGTTATCCATCGCAAATGTTTCTCGGTCTTCATTTTGTTCTCTTTGGTTTTGATCCCGTCAGCGAAAGCAAGGTTCGATTCAAGCTTATAAATGGCGGTGGAGTTGATGTAGGTCATTACAGTCCAAGTTGTACACATGATGATCCTCTTTGCGTTGTTGCAAGAAATGATGGGAAGACGCTTGTCACTGCGTTGTGGGTTGATCATAGTGCCGATATTGGAATGCCTGTTGATGCTGCCTCGGATCGGGATGACATTATGACAATGGTTGGCTTGATGGGTGCACAATTTTCAAAACCATTGGTAGCAAACAAGGTTACTCATCTTATATGCTACAAATTTGAAGGGGAGAAGTATGAGCTTGCCAAGAGATTGAAGACAATTAAGTTAGTGACTCATCGGTGGCTGGAAGATTGTGGTTATGAACTGGAGCTAATGGCGGCAGAGGCTAAAGATTCTGAAGAAAAAGTTGAAGATCACGTGCCAGGGAAATCTGGGGGAAGAAATCTAATCAAGAGTCCCGTTAGTTCAAAAATTAGTACAACTACAACCCATAAATTGTCAAAATCAGCGAGAGAGGCAGCAAATGCCTTCCCAGATTCTACTACTCCTGAGGGATTGCTAAAAGTGAATAAGAGGCATGAGACTCATGACTCATTTATTCCAGAATATGAGAACAGATCTGATTAA 723 0.4219 MPLVFSSMLGTSYPSQMFLGLHFVLFGFDPVSESKVRFKLINGGGVDVGHYSPSCTHDDPLCVVARNDGKTLVTALWVDHSADIGMPVDAASDRDDIMTMVGLMGAQFSKPLVANKVTHLICYKFEGEKYELAKRLKTIKLVTHRWLEDCGYELELMAAEAKDSEEKVEDHVPGKSGGRNLIKSPVSSKISTTTTHKLSKSAREAANAFPDSTTPEGLLKVNKRHETHDSFIPEYENRSD 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2548 240 Gene3D BRCT domain 84 176 IPR036420 -
Glsi10g2548 240 SMART BRCT_7 15 154 IPR001357 -
Glsi10g2548 240 MobiDBLite consensus disorder prediction 165 240 - -
Glsi10g2548 240 Pfam twin BRCT domain 92 146 IPR001357 -
Glsi10g2548 240 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 92 228 IPR044254 -
Glsi10g2548 240 SUPERFAMILY BRCT domain 62 152 IPR036420 -
Glsi10g2548 240 MobiDBLite consensus disorder prediction 181 201 - -
Glsi10g2548 240 ProSiteProfiles BRCT domain profile. 93 150 IPR001357 -
Glsi10g2548 240 MobiDBLite consensus disorder prediction 218 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2548 Glsi-ChrGlsi10 27945391 27947926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2548 100 170 Core DNA Replication Machinery Family AT4G02110 66.279 1.25e-31 120