Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2545 ATGCCATTTTTTTTATTCAATAGAGAAATTAATATGAAACTGGAAGAACTCCAACTCCACCACCAGCAGCGGCAGAGCCAGCAGCAAGATAACCAGATGTGCAGGAAGATCCAACTGGGTGTCGCCGAACTCTCATCGGCCATCGCCGCCGCTGATGATGGGTCTGAGAAGGTTGATGTTGAGAATCCCTTCATCCCTCCTTTCAATTTCGCTGCAGTAGATAACGGCATTTTTAGGTCCGGCTTCCCTGCACCTGCCAACTTCTCCTTTCTTCAATCCATTGGACTGCGCTCCATCATATATCTGTGTCCGGAGCCGTACCCGGCGGCCAACTTGGAGTTCCTGAAGTCAAATGAGATAAAGCTTTTTCAATTTGGGATTGAGGGTCATAAGGAGCCTTTTGTAAATATCCCGGAGGACACAATCTGTCAAGCACTAAGAGTTCTCCTTGATGTCAGGAACCACCCACTTTTAATTCACTGCAAACGGGGAAAGCACCGGACAGGTTGTCTTGTAGGATGTTTGAGAAAATTGCAAAAATGGTGCTTGGCATCTGTGTTTGAGGAGTACCAGCGGTTTGCAGCTTCCAAGGCAAGAGTTTCAGATGAGATATTTATGGAGTCGTTTGATATTTCCAGCCTAAAGCATTTGCCCATGCCATTTTCGTGTTCAGAGAGGTAA 681 0.464 MPFFLFNREINMKLEELQLHHQQRQSQQQDNQMCRKIQLGVAELSSAIAAADDGSEKVDVENPFIPPFNFAAVDNGIFRSGFPAPANFSFLQSIGLRSIIYLCPEPYPAANLEFLKSNEIKLFQFGIEGHKEPFVNIPEDTICQALRVLLDVRNHPLLIHCKRGKHRTGCLVGCLRKLQKWCLASVFEEYQRFAASKARVSDEIFMESFDISSLKHLPMPFSCSER 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2545 226 CDD PFA-DSP_Siw14 64 210 - -
Glsi10g2545 226 PRINTS Plant and fungal dual specificity phosphatase signature 64 81 IPR020428 GO:0016791
Glsi10g2545 226 PRINTS Plant and fungal dual specificity phosphatase signature 101 114 IPR020428 GO:0016791
Glsi10g2545 226 PRINTS Plant and fungal dual specificity phosphatase signature 137 151 IPR020428 GO:0016791
Glsi10g2545 226 PRINTS Plant and fungal dual specificity phosphatase signature 120 134 IPR020428 GO:0016791
Glsi10g2545 226 PANTHER TYROSINE-PROTEIN PHOSPHATASE 50 215 - -
Glsi10g2545 226 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 63 209 IPR029021 -
Glsi10g2545 226 ProSiteProfiles Dual specificity protein phosphatase domain profile. 69 222 IPR020422 GO:0006470|GO:0008138
Glsi10g2545 226 ProSitePatterns Tyrosine specific protein phosphatases active site. 159 169 IPR016130 GO:0016311|GO:0016791
Glsi10g2545 226 Gene3D Protein tyrosine phosphatase superfamily 64 213 IPR029021 -
Glsi10g2545 226 Pfam Tyrosine phosphatase family 65 216 IPR004861 -
Glsi10g2545 226 FunFam probable tyrosine-protein phosphatase At1g05000 63 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2545 Glsi-ChrGlsi10 27536910 27541242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2545 64 226 Protein tyrosine phosphatase (PTP) family AT4G03960 72.393 1.84e-89 260