Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2521 ATGGCTGCAACTTTCTGGGTCACTCTGTTTTTGATGTTTCTGTCGATCAATTTCCATATTCCTTCATCAGAAGCCCAGCAAGAATATGTGAACAACAAGCAGCTAGATTGTGACAATCACTACAATTCCACCGATGGCAATGTCTGCAACGGCGTCAATTCCTGCCTTTCCTACCTCACCTTTCTATCAAGCTCTCCTCAGTACAATACTCCTTCTTCCATAGCCTTTCTCTTGAACTCCAAACCCCCTCTTATTGCTCAAGCCAATAATATCTCCGACGTTGACCCCATCCCCACCAATAAGATGGTCATCGTCCCCGTTACTTGCTCTTGTTCCGGTCGTTACTACCAGCACAACTCCAACTATTCCTTGAAGGGTCAAGGAGAAACCTATTTCAGTGTAGCTAACAACACCTACGAGGCTCTCACTACTTGCCAGGCTCTTGCGGCTCAGAATGTTTATGAAGCCCGGAATCTCACGGTTGGGCTCGATCTAAACGTGCCCCTCAGATGCGCTTGCCCCACAGCTAAGCAGGCTGCTTCTGGGTTCAAGTATTTGCTCACTTATTTGGTTTCTCAAGGGGAATCGGCTTCTTCCATTGCTGAGCTATTTGGGGTCGATGAACAGAGCGTTTTGGATGCGAATGAGCTTTCTTCTGCTTCCATTATTTACTATTTCACACCACTTATGGTTCCTCTGAAAAAGGAACCAACCCTAAAACAGAAGGCGGTCTCTCCCCCACCTCCTCCTCCGCCACCGCCGCCAACTCCTGCTGGGAATGGCGATTCGAACTCTTCCAAGAAATGGGTCATTGTCGGAGTCACGGTCGGAGTTGCTTTTCTTCTTCTTCTCGCCCTGTTGGGATTTTTCCTCGGCTATTATTGCCGCCGCCGGTCTCGGTCGGCGGAGGCGAAGCCTTTCTCGGTTTCTACAACGACGGACACCACCAAGAAGCTCTCAGATTCCACAATGACCAAATCCTGGTCTCTTTCCTCTGAGGGGATTCGGTATGCCATTGACTCGTTAGCAGTTTACAGATTCGAGGACCTCCAGAAAGCCACCAGCTTCTTCAGCGAAGCTAATAGAATCAAGGGCTCTGTTTACAGAGCATCTTTTAAGGGTGATGATGCTGCAGTTAAAATCTACAAAGGGGATGTCTCGAATGAGATCAACATTCTGAAGCGAATCAACCACACCAACATCACGAGGCTCTCTGGCTTCTGCGTATACAAAGGAAATACCTATCTTGTTTACGAGTTTGCTGAAAATGGCTCACTCGACGATTGGCTTCACACAAATAAGTATCAAAATTCCTTGACACTGAGCTGGAGGCAGAGAGTTCAGATTGCTTACGATGTTGCTGATGCCCTGAATTACCTTCACAACTACACGAACCCTCCCTATGTCCACAAGAATTTGAAGAGTGGGAATGTACTTTTGGACGGCAATTTCAGAGCTAAAGTTTCAAATTTTGGGTTAGCGAGACTATTAGATGATGAAGGCGAAGAGGGGTTTCAATTGACGAGGCATGTAATCGGCACTCAAGGATATATGCCACCTGAGTATATCGAGAACGGTGTGATTACCCCAAAATTGGATGTTTTTGCTTTTGGGGTCGTGATTTTGGAGCTACTTTCAGGCAGCGAAGCCATTGTTGGGGACAAGAATGGAGCAGGGGAGGTATTGCTGTCATCATTCGCTGACCAGGTGCTTCAAGGAGATAATGTGAGGGAAAACCTTCGAGCTTTCATGGATCCAACTTTGAGGGGTGAATACCCATTGGATTTGGCATACTCCATGGCACAAATCGCCAAGCGCTGCGTTGATCGGGATATCAATACACGACCAACCATTTCTGATGTGCTCATGACCCTTTCCAAGATTCAATCATCTACCCTAGATTGGGATCCATCTGATGAGCTTGAGCTGTCCAGGTCTGCTAGCAAAATGTCTGACGGCAGATAG 1965 0.4718 MAATFWVTLFLMFLSINFHIPSSEAQQEYVNNKQLDCDNHYNSTDGNVCNGVNSCLSYLTFLSSSPQYNTPSSIAFLLNSKPPLIAQANNISDVDPIPTNKMVIVPVTCSCSGRYYQHNSNYSLKGQGETYFSVANNTYEALTTCQALAAQNVYEARNLTVGLDLNVPLRCACPTAKQAASGFKYLLTYLVSQGESASSIAELFGVDEQSVLDANELSSASIIYYFTPLMVPLKKEPTLKQKAVSPPPPPPPPPPTPAGNGDSNSSKKWVIVGVTVGVAFLLLLALLGFFLGYYCRRRSRSAEAKPFSVSTTTDTTKKLSDSTMTKSWSLSSEGIRYAIDSLAVYRFEDLQKATSFFSEANRIKGSVYRASFKGDDAAVKIYKGDVSNEINILKRINHTNITRLSGFCVYKGNTYLVYEFAENGSLDDWLHTNKYQNSLTLSWRQRVQIAYDVADALNYLHNYTNPPYVHKNLKSGNVLLDGNFRAKVSNFGLARLLDDEGEEGFQLTRHVIGTQGYMPPEYIENGVITPKLDVFAFGVVILELLSGSEAIVGDKNGAGEVLLSSFADQVLQGDNVRENLRAFMDPTLRGEYPLDLAYSMAQIAKRCVDRDINTRPTISDVLMTLSKIQSSTLDWDPSDELELSRSASKMSDGR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2521 654 SUPERFAMILY Protein kinase-like (PK-like) 326 623 IPR011009 -
Glsi10g2521 654 ProSiteProfiles LysM domain profile. 187 231 IPR018392 -
Glsi10g2521 654 FunFam PTI1-like tyrosine-protein kinase 3 421 639 - -
Glsi10g2521 654 Gene3D Phosphorylase Kinase; domain 1 315 420 - -
Glsi10g2521 654 MobiDBLite consensus disorder prediction 242 259 - -
Glsi10g2521 654 ProSiteProfiles Protein kinase domain profile. 313 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2521 654 MobiDBLite consensus disorder prediction 239 262 - -
Glsi10g2521 654 Gene3D Transferase(Phosphotransferase) domain 1 421 643 - -
Glsi10g2521 654 SMART LysM_2 188 232 IPR018392 -
Glsi10g2521 654 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 9 638 - -
Glsi10g2521 654 Pfam LysM domain 189 223 IPR018392 -
Glsi10g2521 654 Gene3D LysM domain 175 244 IPR036779 -
Glsi10g2521 654 Pfam Protein kinase domain 383 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2521 Glsi-ChrGlsi10 26061135 26063099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2521 7 641 Receptor kinase-like Gene Family AT2G33580 53.272 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Glsi10g2521 Pkinase 3.1e-37 CL0016