Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2520 ATGAATCCCCCTGCCATCCGCCGCATCTCTGAATGCTTTATCAAGCCACAGCCTCCACTGGAAGAGTCAAAGCACATGTGCTTTTTATCCCCATGGGATATTGCCATGTTGTCTGCTCACTACATCCAGAAGGGCCTGCTCTTCAAGAAGCCTTTCCTTCCTCATAATCAACCTGCAGATTTCATCCCCTCGCTCTTGGACAAGCTTAAGCACTCCCTTTCTCTCACCCTCCTTCACTTCTACCCACTGGCTGGTCGCCTTTCACTAGGGCGTGATTATGATATTCCTATTTCACGCCAACCCATTCACGACCGTTGGTTCCCAGAGGGTTGTGGGCCACTGATTAATCTTCCCTTCAAAGATTGTGACGAGTTTATAAGCAGATATGAAGCACCGTCGCTGAGAGAGAGAATATTTCACTTCACAGCAGAGTCTATTGCCAAACTAAAAGCAAAGGCCAACCAAGAGTCCAATACCAACAGAATATCTTCATTCCAATCCTTAACGGCGCTTGTTTGGAGATGCATAACTCGTGCGCGTGGTCTTCCTTATGGCAAGACAACTAGATGCAAACTGTCCATTAATAACCGATCAAGAATGGAACCGCCTCTGCCGGAGGAGTACTTCGGAAACGCAATTGAAACGCTGAGTACAGAGACGACGGTAGAGGAGTTGCTGGAAAATGATCTTGGATGGGTAGCGTGGAAGGTACATTTGGCTGTTGCGAACCACAGTGATGGCGCAGTGCTTCAGTTTGCGAAAGAGTTGTGCGAATCTTGTATGGTGTATCAGCTTGGTCGGTTTTTTGACCCGTACTGCGTGATGATGGGGAGCTCACCCAGATTCAACATGTATGGGAATGAATTCGGAATGGGAAAAGCGGTGGCAATTCGAAGTGGGTATGCAAACAAAGTTGATGGGAAAGTGACATCTTACCCAGGATATGAAGGAGGGGGAAGCATAGATTTGGAAATGTGTCTTCCCCCACATTCCATGGTTGCACTTGAATCAGACCCTGAGTTCGTGAATGCATTCTCTCTCCCCAATCCCTTCTAG 1056 0.4763 MNPPAIRRISECFIKPQPPLEESKHMCFLSPWDIAMLSAHYIQKGLLFKKPFLPHNQPADFIPSLLDKLKHSLSLTLLHFYPLAGRLSLGRDYDIPISRQPIHDRWFPEGCGPLINLPFKDCDEFISRYEAPSLRERIFHFTAESIAKLKAKANQESNTNRISSFQSLTALVWRCITRARGLPYGKTTRCKLSINNRSRMEPPLPEEYFGNAIETLSTETTVEELLENDLGWVAWKVHLAVANHSDGAVLQFAKELCESCMVYQLGRFFDPYCVMMGSSPRFNMYGNEFGMGKAVAIRSGYANKVDGKVTSYPGYEGGGSIDLEMCLPPHSMVALESDPEFVNAFSLPNPF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2520 351 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 88 - -
Glsi10g2520 351 Gene3D - 2 112 IPR023213 -
Glsi10g2520 351 Pfam Transferase family 9 88 - -
Glsi10g2520 351 Pfam Transferase family 137 341 - -
Glsi10g2520 351 Gene3D - 126 337 IPR023213 -
Glsi10g2520 351 FunFam Tryptamine hydroxycinnamoyl transferase 121 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2520 Glsi-ChrGlsi10 25926957 25928336 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2520 138 336 Monolignol Biosynthesis Gene Families AT5G48930 28.713 3.60e-18 83.2