Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2515 ATGAATCCCCCTGCCGTCCGACGCATCTCTGAATGCTTTATCAAGCCTCAAAGCCCACTGGAAGAGTCAAAGCACAAGTGCTTTTTATCCCCATGGGATATTGCTATGTTGTCTGCTCACTATATCCAGAAGGGCCTATTGTATGAAGCACCGCCGCTGAGAGAGAGAATATTTCAATTCACAGCAGAGTCTATTGCCAAACTAAAAGCAAAAGCCAACCAGGAGTCCAATACCAACAAAATATCTTCATTCCAATCCTTGACGGCGCTTGTTTGGAGATGCATAACCCGTGCGCGTGGTTTCCCTTATGGCAGGAGAACTAGATGTAGGCTGGCCATCAATAACCGATCAAGAATGGAACCGCCTCTGCCGGAGAAGTACTTCGGAAACGCAATTGAAACGGTGAAGGCAGAGATGACGGCAGGGGAATTGATGGAAAATGATCTTGGATGGGTGGCGTGGAAGGTGCACTTGGCTGTTACGAACCACAGTGACAGCCCAGTGCGTCAGTTTGTGAAAGAATTGCGGGAATCTTGTATGGTGTATCAGCTTGGTCGGTTTTTTGACCCAGACAGCGTGATGATGGGGAGCTCACCCAGATTCAACATGTATGGGAATGAATTCGGAACGGAAAAAGCGGTGGCAATTCGAAGTGGGTATGCAAACAAATTTGATGGGAAAGTGACATCTTACCCGGGATACGCAGGAGGGGGAAGCATAGATTTGGAAATGTGTCTTCCCCCACATTCAATGGCTGCACTTGAATCAGATCCTGAGTTCATGAATGCGGTCTCTTTTCCCAATCCCTTCTAG 813 0.4772 MNPPAVRRISECFIKPQSPLEESKHKCFLSPWDIAMLSAHYIQKGLLYEAPPLRERIFQFTAESIAKLKAKANQESNTNKISSFQSLTALVWRCITRARGFPYGRRTRCRLAINNRSRMEPPLPEKYFGNAIETVKAEMTAGELMENDLGWVAWKVHLAVTNHSDSPVRQFVKELRESCMVYQLGRFFDPDSVMMGSSPRFNMYGNEFGTEKAVAIRSGYANKFDGKVTSYPGYAGGGSIDLEMCLPPHSMAALESDPEFMNAVSFPNPF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2515 270 Pfam Transferase family 57 261 - -
Glsi10g2515 270 Gene3D - 48 256 IPR023213 -
Glsi10g2515 270 FunFam Tryptamine hydroxycinnamoyl transferase 40 257 - -
Glsi10g2515 270 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2515 Glsi-ChrGlsi10 25833522 25834901 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2515 57 255 Monolignol Biosynthesis Gene Families AT5G48930 27.723 1.18e-20 89.0