Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2509 ATGCTTCTCGCCGGAACAGACACATCAGCAGTGACTTTAGAGTGGACAATGTCTTGTTTATTGAACCACCCAGAGGTGTTAGAGAAGGCAAGGGAAGAACTAGACAAACACATAGGACAAGAACGCTTGGTGGATGAGCCAGATGTTTCAAAACTTTCGTACCTTCAAGGGATCATCTCTGAGACGCTTCGATTGCACCCTGCAGCCCCATTGTTGGTACCTCATTTGTCTTCAGATGATTGCACTATAGGAGGATATAACATCCCGCGTGGCACTATGGTATTGGTCAATGCTTGGGCCATCCATAGAGATCCCCAACTGTGGAATGAACCTACGAGTTTCAAGCTCGAGAGGTTTGAGAAGAAAGGGGAAGCCAACAAGTTAATTCCATTTGGTTTGGGAAGAAGGGCTTGTCCTGGAGCAGGGTTGGCTCAGCGAACAGTGAGTTTAACTTTGGGCTTGTTGATTCAGTGCTTTGAATGGAAACGAGCAAGCGAGGAAGAAATTGATATGAGAGAAGGAATTGGGGTTACAATGCCCAAGGTTATTCCCTTAGAAGCCATGTGTAAAGCACGTCACCCAGTCATCAATAAGGTTCTATCTAAAAGCTGA 612 0.4575 MLLAGTDTSAVTLEWTMSCLLNHPEVLEKAREELDKHIGQERLVDEPDVSKLSYLQGIISETLRLHPAAPLLVPHLSSDDCTIGGYNIPRGTMVLVNAWAIHRDPQLWNEPTSFKLERFEKKGEANKLIPFGLGRRACPGAGLAQRTVSLTLGLLIQCFEWKRASEEEIDMREGIGVTMPKVIPLEAMCKARHPVINKVLSKS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2509 203 Pfam Cytochrome P450 1 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2509 203 PANTHER CYTOCHROME P450 82C3-RELATED 1 194 - -
Glsi10g2509 203 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2509 203 PRINTS E-class P450 group I signature 128 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2509 203 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2509 203 PRINTS E-class P450 group I signature 138 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2509 203 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2509 203 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 131 140 IPR017972 GO:0005506|GO:0016705
Glsi10g2509 203 SUPERFAMILY Cytochrome P450 1 192 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2509 203 Gene3D Cytochrome P450 1 195 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2509 203 PRINTS P450 superfamily signature 138 149 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2509 203 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2509 203 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2509 203 PRINTS P450 superfamily signature 129 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2509 Glsi-ChrGlsi10 25626106 25626717 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2509 1 203 Cytochrome P450 AT4G37340 69.118 4.40e-103 304