Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2504 ATGCCCTACTTTTTCTTCTATCCTGTCCTTTCTCTTGCTTTCCCTTTCCTTATCGCTCTCAAGCTCTTGCTCCAAACCAGAAGAAGATTCAAGAACCTCCCACCAGGCCCCCCTTCTCTTCCCATACTGGGCAACCTCCACCAACTCAAAAAGCCACTCCACCGCACCTTTCATGGCATTTCCCAAGACTATGGCCAAATATTTTCTCTCCGGTTCGGGTCCCGTCTTGCGGTCGTCGTTTCATCACCATCTGCAGTTCAAGAATGCTTCACCAAAAACGACATCGTCTTGGCAAACCGGCCCCCATTTCTCAACGGCAAGTACGTCGGTTACAACTACACCTCCTTAGCCTTTTCCCCCTACGGCGACCACTGGCGCAACCTCCGCCGCATCACCACTGTTGAGGTCCTCTCAACGCACCGTCTCAATTCGTTCTTAGAAATGCGAAGAGACGAGATGAAGAGGCTGATACAGAAACTGGCTCAAGAGTCCTGCAATGACGACTTTGTGAAAGTGGAGCTGAAATCCAAGTTTTCAGAGATGACGTTCAACATCGTAATGAGAATGATTTCTGGGAAGAGGTACTGGGGCGACGACTGTGAAGTGGGGGATGTGAAGGAGGCGAGGGAATTTAGAGGGATGATGAAAGAGATGGTGGCGCTAGGAGGGGCAAATAACCCAGGAGATTTCTTGCCTATAGTAAGGTTGTTTGATTTTGATCATTTGGAGAAGAGACTCAAGAGTTTTGGGAAGAGATTCGATGGGTTCTTACAAGGACTGATCGATGAGCATCGAAGTGAGAAGCAGAGTGCAAATACCATGATAGACCATCTCTTGACTATGCAAAAATCACAGCCTGATTACTATACGGATCAAATCATCAAAGGGCTCATTTTGGTTATACTTCTCGCTGGAACAGACACAACAGCAGTAACTTTGGAGTGGGCAATGTCTTGTTTATTAAACCACCCAGAGGTGTTGGAGAAGGCAAGGGAAGAACTAGATAAACACGTAGGACAAAAACGCTTGGTAGGCGACCCAGATGTTTTGAAACTTCCGTACCTTCAAGAGATCATCTCGGAGACGCTTCGATTGCACCCTGCAGCTCCACTGTTGGTACCTCATATGTCTTCAGATGACTGCACCATTGGAGGATATAATGTCCCTCGTGGCACTATGGTTTTGGTTAATGCTTGGGCCATTCATAGAGATCCCCAACTGTGGAGTGAACCTACCAATTTCCAGCCAGAGAGGTTTGAGAAAAAAGGGGAAGCCAATAAGTTAATTCCATTTGGGTTGGGAAGAAGGGCTTGTCCAGGAGTAGGGTTGGCTCAGCGAATGGTGAGTTTAACTTTGGGCTTGTTGATTCAGTGCTTTGAATGGAAACGACCAAGTGAGGAAGAAATTGATATGAAAGAAGGAGTTGGGCTTACGATGCCCAAGGTTACTCCCTTGGAAGCCATGTGTAAAGCACGTTACCCATTCATCGACAAGGTTCTGTCTAAAAGCTGA 1512 0.4702 MPYFFFYPVLSLAFPFLIALKLLLQTRRRFKNLPPGPPSLPILGNLHQLKKPLHRTFHGISQDYGQIFSLRFGSRLAVVVSSPSAVQECFTKNDIVLANRPPFLNGKYVGYNYTSLAFSPYGDHWRNLRRITTVEVLSTHRLNSFLEMRRDEMKRLIQKLAQESCNDDFVKVELKSKFSEMTFNIVMRMISGKRYWGDDCEVGDVKEAREFRGMMKEMVALGGANNPGDFLPIVRLFDFDHLEKRLKSFGKRFDGFLQGLIDEHRSEKQSANTMIDHLLTMQKSQPDYYTDQIIKGLILVILLAGTDTTAVTLEWAMSCLLNHPEVLEKAREELDKHVGQKRLVGDPDVLKLPYLQEIISETLRLHPAAPLLVPHMSSDDCTIGGYNVPRGTMVLVNAWAIHRDPQLWSEPTNFQPERFEKKGEANKLIPFGLGRRACPGVGLAQRMVSLTLGLLIQCFEWKRPSEEEIDMKEGVGLTMPKVTPLEAMCKARYPFIDKVLSKS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2504 503 Pfam Cytochrome P450 34 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 SUPERFAMILY Cytochrome P450 34 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 Coils Coil 143 163 - -
Glsi10g2504 503 FunFam Cytochrome P450 family protein 24 495 - -
Glsi10g2504 503 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 PANTHER CYTOCHROME P450 82C3-RELATED 16 494 - -
Glsi10g2504 503 Gene3D Cytochrome P450 19 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2504 503 CDD CYP81 65 485 - -
Glsi10g2504 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2504 Glsi-ChrGlsi10 25477287 25479726 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2504 9 503 Cytochrome P450 AT4G37370 56.225 0.0 588