LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi10g2491	ATGGAACTCAGATTTGGGTTTCCTGTTTTCTTCTTCTTCTTCTTCTTCTGGTGGGCTTCAATTTTTCTCAGTGCTGAATCACTATGTAAAGAGAGTTGTAATCTAGCTCTTGGTTCGTACTTTGTTTGGCAAGGCTCGAACCTCACATATATTTCACAGGTTATGAAATCCCGGCTTCTTTCAACCCCTGACGATATTGTCAGCTACAACAAGGACCAAGTACCCAACAAAGATAGCGTCAAAGCCCTTATAAGAATCAACGTTCCCTTCCCATGTGATTGCATTGATGGTGAGTTCTTGGGTCATAAGTTTGAGTACGATGTTCAATCAGGGGACACCTATGAGAAGGTTGCTAGGAACAACTATGCCAATTTGACCGACGTTGCGTGGTTGCGGAGGTTCAATAGCTACCCACCAGATAATATTCCCGACACTGGAACATTAAATGTCACGATCAATTGTTCCTGTGGGAACAGCGATGTTTCTAAAGATTATGGGTTGTTCATCACATACCCTCTTAGGCCTGGGGAGACTTTGCAGACTGTGTCACAATCGGTGAATCTTGACGCAGGTTTGCTTCAGAGGTACAATCCAAGTGTGAATTTCAATCAAGGAAGTGGTCTGGTTTATATCCCCGGCAAAGATCAAAATGGAACCTATGTGCCACTTGAGTCTAGAAGTGCAGGAGGTCTAGCTGGTGGGGCTATAGCTGGAATATCCATTGGAGTAATAGTAGGGCTTCTGTTGTTGGCAATTGGTATTTATGTTGGATATTTCCAAAAGAAGAAGATGGAGGAGATGAAATTACTCCCGCAAGATTCCAAAGATGCAACCTCTGGTAATGCTGAATATGGTGGTAATCCTGTTGCTGGTAGTGTTGCTGGCATTACAGTGGACAAATCGGTGGAATTTTCTTATGAGGAACTAGCCACTGCCACAGATAACTTCAGTTTGGCTCATAAAATTGGTCAAGGTGGTTTTGGTGCTGTCTACTATGCAGAGCTGAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCAACAAGAGAATTTCTAGCTGAATTGAAAGTCCTGACAAATGTTCATCACCTTAATTTGGTGCGCTTGATTGGATATTGTGTTGAAGGTTCTCTTTTCCTCGTCTATGAATACATTGAGAATGGAAACTTAAGTCAATATTTGCATGGTTCAGGAGGAAGAGACCCACTGCCATGGCCTAGCAGGGTGCAAATTGCTCTGGATTCAGCCAGAGGTCTTGAATATATTCACGAGCATACAGTTCCTGTGTATATCCATCGTGATATAAAGTCAGCAAATATATTAATAGACAAAAATCTCCACGGCAAGGTTGCAGATTTTGGATTGACCAAACTGACAGAAGTTGGCAGCTCATCACTTCCTACTGGTCGACTTGTGGGAACCTTCGGATACATGCCACCCGAATATGCTCAGTATGGTGATGTTTCTCCCAAAGTAGATGTCTATGCTTTTGGAGTAGTTCTTTATGAACTTATTTCTGCTAAGGATGCTATCGTCAAGACTAATGAATCAATTACTGACTCAAAGGGCCTCGTTGCTCTGTTCGAAGAACTTCTTAATCAACCCGATCCTACTGAAGATCTTCGAAAACTGGTTGACCCGAGGCTTGGAAATGACTACCCTATTGATTCAGTTCGTAAGGTGGCACAACTAGCCAAAGCATGCACACAGGACAATCCCCAACTCCGTCCAAGTATGAGATCTATAGTTGTTGCTCTTATGACACTTTCATCTGCAACTGAGGATTGGGATATTGGATCCTTCTATGAAAATCAAGCTCTAATGAATTTGATGTCTGGAAGATAG	1851	0.4257	MELRFGFPVFFFFFFFWWASIFLSAESLCKESCNLALGSYFVWQGSNLTYISQVMKSRLLSTPDDIVSYNKDQVPNKDSVKALIRINVPFPCDCIDGEFLGHKFEYDVQSGDTYEKVARNNYANLTDVAWLRRFNSYPPDNIPDTGTLNVTINCSCGNSDVSKDYGLFITYPLRPGETLQTVSQSVNLDAGLLQRYNPSVNFNQGSGLVYIPGKDQNGTYVPLESRSAGGLAGGAIAGISIGVIVGLLLLAIGIYVGYFQKKKMEEMKLLPQDSKDATSGNAEYGGNPVAGSVAGITVDKSVEFSYEELATATDNFSLAHKIGQGGFGAVYYAELRGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQYLHGSGGRDPLPWPSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNLHGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKDAIVKTNESITDSKGLVALFEELLNQPDPTEDLRKLVDPRLGNDYPIDSVRKVAQLAKACTQDNPQLRPSMRSIVVALMTLSSATEDWDIGSFYENQALMNLMSGR	616

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi10g2491	616	ProSiteProfiles	Protein kinase domain profile.	316	591	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi10g2491	616	Pfam	Protein tyrosine and serine/threonine kinase	318	587	IPR001245	GO:0004672\|GO:0006468
	Glsi10g2491	616	SUPERFAMILY	Protein kinase-like (PK-like)	297	588	IPR011009	-
	Glsi10g2491	616	SMART	serkin_6	316	590	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi10g2491	616	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	432	444	IPR008271	GO:0004672\|GO:0006468
	Glsi10g2491	616	FunFam	PTI1-like tyrosine-protein kinase 3	387	602	-	-
	Glsi10g2491	616	FunFam	LysM receptor kinase 2	295	386	-	-
	Glsi10g2491	616	CDD	STKc_IRAK	322	585	-	-
	Glsi10g2491	616	Gene3D	Transferase(Phosphotransferase) domain 1	387	606	-	-
	Glsi10g2491	616	Gene3D	Phosphorylase Kinase; domain 1	291	386	-	-
	Glsi10g2491	616	PANTHER	CHITIN ELICITOR RECEPTOR KINASE 1-RELATED	13	602	IPR044812	GO:0019199\|GO:0045087
	Glsi10g2491	616	ProSitePatterns	Protein kinases ATP-binding region signature.	322	344	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi10g2491	Glsi-ChrGlsi10	24767779	24779326	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi10g2491	1	616	Receptor kinase-like Gene Family	AT3G21630	58.665	0.0	721

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LysM	Glsi10g2491		PK_Tyr_Ser-Thr	5.4e-46	CL0016