Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2478 ATGGGACTGAGAGATTTTCATCTGAAATTCAAGGCTTTCAGGCTAAAGCGCTTTCTCTTAGGAAATGGAGGCAATAGAAAGGATCATGCTTCTACAAAGAAGCAATCGTGGATGATGCCATTATCACATGGCTATCATGTGGTCGAGCATCATATAGTCACAGGTGGTTCTGATGATTCAGATTGTGATACAGTTGTGGTGCAGAGAGAGCAACTGGAACACACAGAATTGTGGTATTTCGGAATCTTTGATGCCCTAATTGGAGATGGGGTTATCAAGTATATGCAATCCCATTTCTTTGACAAGAAGCTAAAAGAGTCTCATATAAGTAGAAAAAGCAAAGAAACACTGAAGAGAGCTTACTTTAGTGCAAGAGCAAAGGTCAGAGAGGAAGAGAAATCAGAGGAGGCATGCAGAATGGGTTCAGTATCTGTGATGGTGATAAATGGAGAAAAACTTGTGATGGCTAACATGGGAGATTACGGAGCTGTTGTGTGCAGAGATGGGATAGCTCATCAGAAAACCAGCAGACACCAGCAGTCAGCCAAAAGACATTGGACTCGCAGACTCTTCTCAGTACGCATACTAGTAGGTGAATCGGGCAATGCAGCAGGGACAAGGCATTCTAGAAGCTCAGAACTTGTTGTGGGAGCTGAAAGGATCGATTCTGATACTGAGTTTTTGATCGTAGCAAGCAGTGGCATATGGGAGGTGATGAAGAGCCAAGAGGCAGTGAATCTCATCAGGCACATTGACGATCCACAAGAAGCTGCTGAGTGCTTGGCGAAGGAAGCTATGATTCGGATGAGCAAAAGCAACATCTCATGCATAATCATTCGATTCGACTAA 849 0.437 MGLRDFHLKFKAFRLKRFLLGNGGNRKDHASTKKQSWMMPLSHGYHVVEHHIVTGGSDDSDCDTVVVQREQLEHTELWYFGIFDALIGDGVIKYMQSHFFDKKLKESHISRKSKETLKRAYFSARAKVREEEKSEEACRMGSVSVMVINGEKLVMANMGDYGAVVCRDGIAHQKTSRHQQSAKRHWTRRLFSVRILVGESGNAAGTRHSRSSELVVGAERIDSDTEFLIVASSGIWEVMKSQEAVNLIRHIDDPQEAAECLAKEAMIRMSKSNISCIIIRFD 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2478 282 Gene3D - 52 282 IPR036457 -
Glsi10g2478 282 ProSiteProfiles PPM-type phosphatase domain profile. 42 281 IPR001932 -
Glsi10g2478 282 SMART PP2C_4 40 279 IPR001932 -
Glsi10g2478 282 SUPERFAMILY PP2C-like 45 282 IPR036457 -
Glsi10g2478 282 CDD PP2Cc 62 281 IPR001932 -
Glsi10g2478 282 Pfam Protein phosphatase 2C 220 274 IPR001932 -
Glsi10g2478 282 Pfam Protein phosphatase 2C 79 181 IPR001932 -
Glsi10g2478 282 PANTHER PROTEIN PHOSPHATASE 38 281 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2478 Glsi-ChrGlsi10 24469834 24474406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2478 1 281 PP2C-type Phosphatase Gene Family AT3G23360 47.518 1.67e-84 252