Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2472 ATGGACAGGAAATCACATGCTGGCCTGGTCTTCTTGCTCATCCTTCTCTTTGCTGCTCAAGAGATGGTGATGCAAACGGAGGGAAAGACCTGTGAGAAACCCAGCAAATTCTTCTCTGGTCCATGTATTGGCACATCTGGCACCCGTCAATGTGAATATCTGTGTAGGAGAGGTGAAGGACTACAAGGTGGCCATTGCAAAGGGCTCAAGTGCGTTTGCACCTATGTTTGTTCATCGTCATCAGATATATAA 252 0.4683 MDRKSHAGLVFLLILLFAAQEMVMQTEGKTCEKPSKFFSGPCIGTSGTRQCEYLCRRGEGLQGGHCKGLKCVCTYVCSSSSDI 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2472 83 Pfam Gamma-thionin family 29 77 - -
Glsi10g2472 83 SUPERFAMILY Scorpion toxin-like 29 77 IPR036574 -
Glsi10g2472 83 PANTHER DEFENSIN-LIKE PROTEIN 1 8 74 - -
Glsi10g2472 83 Gene3D - 24 83 IPR036574 -
Glsi10g2472 83 SMART gth_4 30 77 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2472 Glsi-ChrGlsi10 24272154 24272848 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2472 10 77 Plant Defensins Gene Families AT1G61070 34.286 6.74e-09 46.2