Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2453 ATGAAGGAATTTGTTCTTTATGCTTGTGTACTATTCCATGTGAGTCTTTTTGCTTTGCTTTCCTATAGCAAAGCCAATCAGGCAGATAATCTTAATGAGTTAATCCAGTCCAGGAGATCAAAAAAGTTTCCTCTAACACTTTCTTGGGAAGAGGAGGATGTGTCCAAGGAGCATTCTTCAGTTTATGTTTCAACCCAAGAGGGGCTAAGACAGGCTGACAAGATTTCTGCATTGCCTGGCCAGCCTTATGGGGTGAATTTTGATCAGTATGCAGGCTATGTCACAGTTGATCTAAAGGCTGGAAGAGCTCTTTTCTATTATTTTGTGGAGTCTCCCCAAAACTCTACAACTAAACCCTTGGTGTTGTGGCTCAATGGAGGGCCAGGTTGCTCCTCACTGGGGTTGGGGGCCTTGGAGGAACTGGGACCCTTTCGAGTCAACTCTGATGGCAAAACACTATTCCGGAACAAATATGCTTGGAACAATGTGGCAAATGTACTGTTCTTGGAATCTCCTGCTGGAGTGGGGTTTTCTTACTCAAATACTACTTCTGACTATGACAGAGCAGGCGATAAGAACACAGCCAATGACGCCTATGTATTTCTAATAAATTGGCTAGAGAGGTTTCCACAATACAAATCCAGGGATTTTCTCATAACCGGAGAGAGCTATGCTGGTCATTACGTGCCTCAACTTGCTTACACCATTTTGGTCAACAATAAACTCAAAAACCAAACCATTATTAACCTCAAAGGCATCGCTATAGGGAATGCATTGATAGATGATGCTACAAATACAAAGGGACTGTTTGATTACTTATGGACTCATGCTCTGAGCTCAGACGAAACCCACGAAGCCATTGATAAGTTCTGTGACTTTGCTTCTGAAAATGCTTCTGACGAATGTGTTAACTCAATAAGAAGGGCCCTCACGGATACGGGAAACATAGATTTTTATAACATTTATGCTCCACTTTGCCATGACTCTTCCCTCAGAAATGGCTCTACTGGTTCTGTTTATGATTTTGATCCCTGCACTGATAATTATGTGAAAGCCTATCTAAATAACCCAGAGGTCCAGCTAGCTCTTCATGCAAAACCCACAAATTGGAGCCAGTGCAGTGGAGACACAGATGCAGTTGTGTCGGTAACATCTTCAAGGTACTCAATCAACACCCTCAAGCTACCTATTCTGGTTCCTTGGCGGCCATGGTACTCTGAAAAGGAGGTAGGAGGATATGTTGTGGCATACAAGGGAGTAATATTTGTGACTGTAAGAGGAGCTGGGCATTTGGTTCCTAGTTGGCAACCAGCAAGGGCCCTAACTCTTATCACATCATTCCTTAAAAAAGCTCTACCTCCTTTTTCACCATGGCCTTCTGCTAAGGCCCCACCACCAAGCTTCCACTAA 1410 0.434 MKEFVLYACVLFHVSLFALLSYSKANQADNLNELIQSRRSKKFPLTLSWEEEDVSKEHSSVYVSTQEGLRQADKISALPGQPYGVNFDQYAGYVTVDLKAGRALFYYFVESPQNSTTKPLVLWLNGGPGCSSLGLGALEELGPFRVNSDGKTLFRNKYAWNNVANVLFLESPAGVGFSYSNTTSDYDRAGDKNTANDAYVFLINWLERFPQYKSRDFLITGESYAGHYVPQLAYTILVNNKLKNQTIINLKGIAIGNALIDDATNTKGLFDYLWTHALSSDETHEAIDKFCDFASENASDECVNSIRRALTDTGNIDFYNIYAPLCHDSSLRNGSTGSVYDFDPCTDNYVKAYLNNPEVQLALHAKPTNWSQCSGDTDAVVSVTSSRYSINTLKLPILVPWRPWYSEKEVGGYVVAYKGVIFVTVRGAGHLVPSWQPARALTLITSFLKKALPPFSPWPSAKAPPPSFH 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2453 469 Gene3D alpha/beta hydrolase 70 328 IPR029058 -
Glsi10g2453 469 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Glsi10g2453 469 FunFam Carboxypeptidase 69 328 - -
Glsi10g2453 469 Gene3D - 376 451 - -
Glsi10g2453 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 437 IPR001563 GO:0004185|GO:0006508
Glsi10g2453 469 Pfam Serine carboxypeptidase 79 374 IPR001563 GO:0004185|GO:0006508
Glsi10g2453 469 ProSitePatterns Serine carboxypeptidases, histidine active site. 420 437 IPR033124 GO:0004185
Glsi10g2453 469 FunFam Carboxypeptidase 361 450 - -
Glsi10g2453 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 179 IPR001563 GO:0004185|GO:0006508
Glsi10g2453 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Glsi10g2453 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 420 433 IPR001563 GO:0004185|GO:0006508
Glsi10g2453 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 168 IPR001563 GO:0004185|GO:0006508
Glsi10g2453 469 Gene3D - 345 375 - -
Glsi10g2453 469 SUPERFAMILY alpha/beta-Hydrolases 73 450 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2453 Glsi-ChrGlsi10 23690063 23708328 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2453 374 448 Calmodulin-binding Proteins AT2G22960 28.947 7.01e-07 47.8